Pairwise Alignments

Query, 546 a.a., ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

Subject, 544 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Serratia liquefaciens MT49

 Score =  120 bits (301), Expect = 1e-31
 Identities = 115/465 (24%), Positives = 198/465 (42%), Gaps = 43/465 (9%)

Query: 69  LFAGLVTYDVKGGIHNEVAESITSSDNATHYVIKIKKGWKFTDGTPVTAHSFVDAWNYTA 128
           LF GLV  D  G +   VA    ++DN T Y+  ++K  ++++G PVTA  FV +W    
Sbjct: 71  LFEGLVNQDANGKVIPGVATRWQTTDNQT-YIFTLRKDARWSNGDPVTAKDFVYSWQRLV 129

Query: 129 NSANKQGSASF--FSTIQGYDDLQKSDVDPSATLSGLKVVDDYTIDVKLNQPDSAFPVKS 186
              +    A F   + IQ  D++    +   A   G+  +DDYT+ V+LN+P   F   +
Sbjct: 130 EPKSLSPFAWFAQLAGIQNADEIITGKLP--ADKLGVTALDDYTLKVQLNKPVPYFVSLT 187

Query: 187 GSHAYMPLPESAFKDPKKFGE------NPVGNGPYKFVSWSHNRSIKMVKNPDYKGNRVA 240
            + +  P  ++  +   KFG       N VGNG YK      N  + +  N  Y  +   
Sbjct: 188 ANFSLFPANKAVVE---KFGNDWTKVGNLVGNGAYKLQERVVNEKLVLTPNEHYWDHAHT 244

Query: 241 KNDGLDFMIYTSPDSAYADLRGGNLDFTHAIPSTALKTFQSDKSIKAYNQPGGNTLTFTI 300
               + F+      +A      G++D T + P    +    D   + Y      T  +  
Sbjct: 245 VLTKVTFVPINQESNATKRYLAGDIDITESFPKNMYQKLLKDIPDQVYTPDQLGTYYYAF 304

Query: 301 PEWLDHFGQNEEGNLR-RQAISMSIDRKTIAEKIFNNTSTPAVDFIAAPISAYSKNLKGN 359
                +  +    ++R R+A+S +IDRK IAEK+      PA  F     + +   +   
Sbjct: 305 -----NTQRAPTNDVRVRKALSYAIDRKIIAEKVLGTGEKPAYHFTPDVTAGFKPEV--- 356

Query: 360 EVLKYNPKKAKELWAKANAISPWSG-------EFGIAYNADGTAKNWVEAICNYIKNTLD 412
            +L+  P+   EL A+A A+   +G       +  + YN   + +    A+ +  K TL 
Sbjct: 357 SLLQQQPQ--AELDAQAKALMQAAGYGPNNPLKLTLLYNTSESHQKIAIAVASMWKKTLG 414

Query: 413 IDAKSIPMSTSDEFLSNVDSGKMTS--AYRSGWGPDYPSADNYLVQLYDSSSADGKGGNS 470
           ID K      + E+ + +DS    +    R+ W  DY  A  +L  L  + S     GN 
Sbjct: 415 IDVK----LQNQEWKTYIDSRNTGNFDVVRASWVGDYNEASTFLSLLSSTHS-----GNI 465

Query: 471 GNYKNPEFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLW 515
             +K+ ++D ++ +A    S       Y + E+I+ +  P  P++
Sbjct: 466 AKFKSADYDRLLAQASRETSAAALTADYNKLEQIIAEQAPIAPIY 510