Pairwise Alignments

Query, 546 a.a., ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

Subject, 547 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Dickeya dianthicola ME23

 Score =  128 bits (321), Expect = 6e-34
 Identities = 124/492 (25%), Positives = 207/492 (42%), Gaps = 30/492 (6%)

Query: 52  LFPGAVTEAGGGKVVDQLFAGLVTYDVKGGIHNEVAESITSSDNATHYVIKIKKGWKFTD 111
           L P  +       +   L  GL+     G     VAES  + +    +   ++K  K+++
Sbjct: 54  LDPHKIEGVPESNIARDLLEGLLVTSPDGHPAPGVAESWDNKEFKV-WTFHLRKDAKWSN 112

Query: 112 GTPVTAHSFVDAWNYTANSANKQGSASF--FSTIQGYDDLQKSDVDPSATLSGLKVVDDY 169
           G PVTA  FV +W   ++       AS+  F  I   DD+      P A   G+K +DD+
Sbjct: 113 GEPVTAQDFVYSWQRISDPKTASPYASYLQFGHIVNIDDVVAGKKSPDAL--GVKAIDDH 170

Query: 170 TIDVKLNQPDSAFPVKSGSHAYMPLPESAFKDPKKFGE------NPVGNGPYKFVSWSHN 223
           T +V L++P   F       +  P+ +   K  +KFG+      N VGNG YK   W  N
Sbjct: 171 TFEVTLSEPVPYFYKLLVHPSTFPVNK---KVVEKFGDKWTQPANWVGNGAYKLNEWIVN 227

Query: 224 RSIKMVKNPDYKGNRVAKNDGLDFMIYTSPDSAYADLRGGNLDFTHA-IPSTALKTFQSD 282
             I + +N +Y  N     + + ++  +S  +     R G +D T+  +P    +  + +
Sbjct: 228 EKIVLERNSNYWDNAHTIINKVTYLPISSEVTDVNRYRSGEIDMTYNNLPIELFQKLKKE 287

Query: 283 KSIKAYNQPGGNTLTFTIPEWLDHFGQNEEGNLRRQAISMSIDRKTIAEKIFNNTSTPAV 342
              +    P   T  + I      F         RQA+ + +D+  +  K+     TPA 
Sbjct: 288 IPNEVKADPYLCTYYYEINNQKAPFNDARV----RQALVLGLDQDILTNKVKAQGDTPAF 343

Query: 343 DFIAAPISAYSKNLKGNEVLKYNPKK----AKELWAKANAISPWSGEFGIAYNADGTAKN 398
            F    I      L   E + ++ +K    AK+L A+A   +     F + YN     K 
Sbjct: 344 GFTPPYIDGLDGKLTPPEWVSWSREKRNAEAKKLLAEAGFTAEKPLTFNLLYNTSDLHKK 403

Query: 399 WVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLVQLY 458
              A  +  KN + ++AK +       FL +   G    A R+GW  DY     +L  + 
Sbjct: 404 LAIAASSIWKNNIGVEAK-LENQEWKTFLDSRHQGTFDVA-RAGWCADYNEPTTFLNIMI 461

Query: 459 DSSSADGKGGNSGNYKNPEFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLWNQN 518
            +SS+     N+ +YK+ +FD +M  AL+A + EE    Y+Q E +L +D   +P++   
Sbjct: 462 ANSSS-----NTSHYKSADFDKLMTNALAAKTEEERANVYRQAETLLEKDAVVVPVYYYA 516

Query: 519 ATAASTSAVSGV 530
            T      V G+
Sbjct: 517 NTRLVKPYVGGI 528