Pairwise Alignments

Query, 546 a.a., ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

Subject, 539 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Dickeya dianthicola 67-19

 Score =  134 bits (337), Expect = 9e-36
 Identities = 115/509 (22%), Positives = 218/509 (42%), Gaps = 32/509 (6%)

Query: 40  IISVYGSEPAHPLFPGAVTEAGGGKVVDQLFAGLVTYDVKGGIHNEVAESITSSDNATHY 99
           ++   GSEPA  L P  V     G ++   F  LV+    G +   +A+   + DN   +
Sbjct: 39  LVRANGSEPAS-LDPHKVESDVEGNLIHDFFEKLVSVRDDGTVMQGLADRWENKDNQV-W 96

Query: 100 VIKIKKGWKFTDGTPVTAHSFVDAWNYTANSANKQGSASFFSTIQGYD--DLQKSDVDPS 157
              ++ G K++DG+P+TA   V +W    +        ++  ++   +  D+      P 
Sbjct: 97  TFHLRPGLKWSDGSPITADDVVFSWQRLVDPKTLSPYQTYVGSMHVLNAGDIIAGKKSPQ 156

Query: 158 ATLSGLKVVDDYTIDVKLNQPDSAFPVKSGSHAYMPLPESAFKDPKKFGE------NPVG 211
               G+K +D  T+ V L+QP S F      +  + +P++A +   KFG+      N VG
Sbjct: 157 EL--GIKALDKQTVQVTLDQPLSYFLPMVDHYVMVTVPKAAIE---KFGDKWTQTANFVG 211

Query: 212 NGPYKFVSWSHNRSIKMVKNPDYKGNRVAKNDGLDFMIYTSPDSAYADLRGGNLDFTHAI 271
           +GP+    W  N  I   +N +Y  N     + + ++   S  +     + G +D T+ +
Sbjct: 212 SGPFIPTDWVVNERITAKRNANYWDNAHTVLNKVTYLAIVSNTAEVNRYKAGEVDATYTM 271

Query: 272 PSTALKTFQSDKSIKAYNQPGGNTLTFTIPEWLDHFGQNEEGNLRRQAISMSIDRKTIAE 331
           P+   K+ + +   +    P  +T  +        F         R+A+ +++D+  IAE
Sbjct: 272 PNQLFKSLKEELPNEVKVTPYLSTYIYRFNTQKPPFNDPRV----RRALDLALDKSVIAE 327

Query: 332 KIFNNTSTPAVDFIAAPISAYSKNLK--GNEVLKYNPKKAKELWAKANAISPWSGEFGIA 389
           K+      PA +++   ++ Y+ N         +    +AK+L  +A        +F + 
Sbjct: 328 KVLGQGQVPAYNYVPRGMAGYTSNQPEWAGWTQQQRNAEAKKLLKEAGYDQSHPLKFQLL 387

Query: 390 YNADGTAKNWVEAICNYIKNTLDIDAKSIPMSTSDEFLSNVDSGKMTS--AYRSGWGPDY 447
           YN   + +    A  +  K +L  +A  +    + E+ + +D+ +  +    R+ WG DY
Sbjct: 388 YNTSESHQKIAIAAASMWKQSLGAEATLL----NQEWKTLLDTSRTGNFEVVRNSWGADY 443

Query: 448 PSADNYLVQLYDSSSADGKGGNSGNYKNPEFDAMMDKALSAPSTEEADKYYQQGEEILLQ 507
                Y   L  + S      N+G + +  +D ++DKA+ A S ++    Y Q E IL Q
Sbjct: 444 NEPSTYFDTLRANDS-----NNTGKFNDKAYDEVLDKAVKASSLDDRSALYHQAEAILQQ 498

Query: 508 DLPAIPLWNQNATAASTSAVSGVEFDYGG 536
            +P IP++    +      V G + D  G
Sbjct: 499 QMPLIPIYYYVRSQMVKPYVGGFKPDLKG 527