Pairwise Alignments

Query, 265 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Bifidobacterium breve UCC2003

Subject, 235 a.a., RNA methyltransferase, RsmE family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 50.1 bits (118), Expect = 4e-11
 Identities = 51/235 (21%), Positives = 103/235 (43%), Gaps = 22/235 (9%)

Query: 28  LTLPAHIKRHAVQAMRLKAGDSLQLSDGRGLRIHAVMADPEAGLAEVVTVGREPEPLTRL 87
           +TL     +H V+ +R   GD + ++DG+G      +   +   AE+  + ++  PL   
Sbjct: 15  ITLHPEESKHLVKVLRKNVGDEVFMTDGKGHLFSCQITKGDLKRAELSIIEKKATPLPDH 74

Query: 88  ALIQALAKTGHDEQA---VDMATQIGVDQVVPWQADRSIAKW-KAGRTDKKWNAVLDAAT 143
            +  A+A T + ++    ++  T+IG  ++   +   S   + K  R +KK    + +A 
Sbjct: 75  HIHLAIAPTKNTDRMEWMLEKITEIGFSKLTFIKTSNSERSFLKPDRLEKK----MVSAC 130

Query: 144 EQARRAYKPQLEACANSKEVVAICRRACVHGDLVIVLHQDATDTWTGVEAKVAQLVERTL 203
           +Q+ + + P ++   + +E++    +  +   +  V        +   +AK A L+    
Sbjct: 131 KQSLKTHFPIIDPLTSFEELLDKHAQDDLQKFIAYVDENHRHHLFEVAKAKGAYLI---- 186

Query: 204 SDGKPRTVSVVVGPEGGISEQEVADFTKAGAVSCVLGSNILRAATAGPVALSLLS 258
                     ++GPEG  S +E+      G +   LG + LR  TAG  A+  LS
Sbjct: 187 ----------LIGPEGDFSPEEINLAKAKGFIPVSLGHSRLRTETAGLAAVHTLS 231