Pairwise Alignments

Query, 540 a.a., 3-dehydroquinate synthase from Bifidobacterium breve UCC2003

Subject, 362 a.a., 3-dehydroquinate synthase (NCBI) from Escherichia coli BW25113

 Score =  198 bits (504), Expect = 2e-55
 Identities = 125/338 (36%), Positives = 170/338 (50%), Gaps = 17/338 (5%)

Query: 187 YDVVIGEGAMNRLVDVLGSKPVRIALIHTQPVQR--HSDRARALLRQGGYEVSDIVIPDA 244
           Y + I  G  N     L  K     ++ T       + D+ R +L Q G  V  +++PD 
Sbjct: 13  YPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQAGVNVDSVILPDG 72

Query: 245 EPGKTITVANRIWERLGNEGFTRSDAVVGLGGGAATDLAGFVAATWMRGVRYVNCPTSLL 304
           E  K++ V + ++  L  +   R   +V LGGG   DL GF AA++ RGVR++  PT+LL
Sbjct: 73  EQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGVRFIQVPTTLL 132

Query: 305 AMVDASTGGKTGINTPQGKNLVGSFYTPAGVLADMNALVTLPNDIFIEGLGEVAKSGFIR 364
           + VD+S GGKT +N P GKN++G+FY PA V+ D++ L TLP      GL EV K G I 
Sbjct: 133 SQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELASGLAEVIKYGIIL 192

Query: 365 DPEILTILERHAAQLRAFDGSTFLGSPLEDVVAELIERTVTVKAYHVSSDLKEKGLREFL 424
           D      LE +   L   DG           +A  I R   +KA  V++D +E GLR  L
Sbjct: 193 DGAFFNWLEENLDALLRLDG---------PAMAYCIRRCCELKAEVVAADERETGLRALL 243

Query: 425 NYGHTLAHAIE-QLEHFRWRHGNAVAVGMVYAAELAHLTGHIDQDLVDYHRSLLTSLGLP 483
           N GHT  HAIE ++ +  W HG AVA GMV AA  +   G           +LL   GLP
Sbjct: 244 NLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLKRAGLP 303

Query: 484 TSWNGG---SFDDVLALMHRDKKARGNELRFVVLDSIG 518
              NG    S    L  M RDKK    E+R ++  +IG
Sbjct: 304 V--NGPREMSAQAYLPHMLRDKKVLAGEMRLILPLAIG 339