Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 887 a.a., alanyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  582 bits (1501), Expect = e-170
 Identities = 366/903 (40%), Positives = 504/903 (55%), Gaps = 49/903 (5%)

Query: 5   DIAKRYLDYFAKHDHLVMPSASLISPN-PTTLFTIAGMVPFIPYLLGEQTPPKRRMTSNQ 63
           +I   +LDYF K+ H ++PS+ L+  N PT +FT AGMV F     G ++ P     S Q
Sbjct: 6   EIRSTFLDYFKKNGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLESRPYSTAASAQ 65

Query: 64  KCVRT----LDIDEVGKTTRHGTFFQMLGNFSIGDYFKEEAIHYAWELLTTPQDQGGYGF 119
           KCVR      D+D VG T RH TFF+MLGNFS GDYFKEEAI +AW L+T       +G 
Sbjct: 66  KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAITHAWNLITKE-----FGI 120

Query: 120 DPEKLWVTTFTDDEEARSIWKN-EGFDPEHMQIFGMEDNFWTTGGPGPGGPCSEIYVDRG 178
           D  +L VT +  D+EA ++WK   GF  + +      DNFW  G  GP GPCSEI+ D G
Sbjct: 121 DRNRLLVTVYHTDDEAFNLWKKIAGFSDDRIIRIPTSDNFWAMGDTGPCGPCSEIFYDHG 180

Query: 179 PEY--GRDGGPAADETRFIEIWDLVFENYEVDNVKSKTDLHIVGELAQKNIDTGAGLERL 236
                G  G P  D  RFIEIW+LVF  YE    + + DL       + +IDTG GLER+
Sbjct: 181 DHIWGGPPGSPEEDGDRFIEIWNLVFMQYEQLTKEERIDL------PRPSIDTGMGLERI 234

Query: 237 AYLMQGKQNIYETDEVFPVIEAAERLSG-RKYGEDEAADVKFRVVADHVRSALMIMSDGV 295
           + L+QGK + Y+TD    +I A+   +G    GE  A+    RV+ADH+RS+  +++DGV
Sbjct: 235 SALLQGKHDNYDTDLFRALIAASVEATGVPAEGEHRASH---RVIADHLRSSAFLIADGV 291

Query: 296 RPSNVGRGYVLRRLLRRTVQAMRVLGVTDPVIPELLPVSKEAMVASYPELNDTFHDVSEA 355
            PS+ GRGYVLRR++RR ++   +LG  DP+I  LLP   + M  +YPEL      +SE 
Sbjct: 292 LPSSEGRGYVLRRIMRRAMRHAELLGSRDPLIYRLLPALIQQMGRAYPELVRAEALISET 351

Query: 356 AYGEEDAFRRTLENGIEILDVAVKKAKKTADPVVSGSDAFTLHDTYGFPIELTLEMAADQ 415
              EE  FR+TLE G+ +L  A     K    ++ G  AF L+DTYGFP++LT +    +
Sbjct: 352 LKLEETRFRKTLERGLSLLSDATSTLHK--GDMLDGETAFKLYDTYGFPLDLTQDALRAR 409

Query: 416 GVKVDEAKFRELMAEQKSRARADALKKRHNVDLSVYDDFKKTLAKPIDFLGYTDMSARAK 475
            + VD + F + M  QK+ AR+           +V+ + K+      +FLGY   SA   
Sbjct: 410 EIGVDISGFTDAMQRQKAEARSHWAGSGDKATETVWFELKEKFGAT-EFLGYDTESAEGV 468

Query: 476 VIGIMQEGKGSVPAVTGPANVEVILDRTPFYAEAGGQLADQGEILSDDGAVLEVDDVQKP 535
           +  I+++GK    A  G   V +++++TPFY E+GGQ+ D G I+ D G   +V   QK 
Sbjct: 469 IQAIVRDGKEVDSAAEGET-VHIVVNQTPFYGESGGQMGDTGVIVGDAGT-FDVSGTQKK 526

Query: 536 IKDLIVHQCRLTEGTLVVGAEVNANIDLARRGAIARSHTATHMVHKALREELGPQATQRG 595
            + L VH   +++G L V   V   +D  RR  +  +H+ATH++H+ALRE LG    Q+G
Sbjct: 527 GEGLFVHSGTVSKGGLKVNEAVQLTVDHDRRSRLRANHSATHLLHEALREVLGTHVAQKG 586

Query: 596 SEDAPNRLRFDFQWSKAPAKSVISAVEERVNDKLRDNLAVTTKEMKFDDAIALGAMHLFG 655
           S  AP RLRFD    K  +   +  VE+  N+ +  N  V T+ M  DDAIA GAM LFG
Sbjct: 587 SLVAPERLRFDVSHPKPMSAEELKVVEDMANEIVLQNSPVVTRLMSVDDAIAEGAMALFG 646

Query: 656 EKYGDVVRVVSIG--------EDGWSRELCGGTHVDHVGKIGMVNILSEASIGSGVRRVD 707
           EKYGD VRVVS+G           +S ELCGGTHV   G+IG++ IL E+++GSGVRR++
Sbjct: 647 EKYGDEVRVVSMGTGLHGAKANRPYSVELCGGTHVAATGQIGLIRILGESAVGSGVRRLE 706

Query: 708 AVVGQGAYDFNAREHALVSQLSDKLNARPDELAERVNTLLAKLKESDRRLASMYEAQLAA 767
           AV GQGA  + A +   V  L+  L  +P ++  RV  LL + K+ +R LA   +A+   
Sbjct: 707 AVTGQGALAYLAEQDERVKALASSLKVQPGDVLSRVEGLLDERKKLERELA---DARKKL 763

Query: 768 AVPALVEDA----KNSAAPVKVAIKNVGHFGAVDALRKTVLDVRGQLGEDAPAVVALAGV 823
           A+     DA        A V    K++    A D L+    + +  LG     VV L  V
Sbjct: 764 AMGGGSSDAGANDVQQVAGVNFLAKSLSGIDAKD-LKGLADEAKANLGS---GVVLLIAV 819

Query: 824 NEDDKPMVAVATNEAARKAGIKAGDLVRGASKILGG-GGGGKPDFAQGGGADASKINEAL 882
           ++D K     A  E        A D+VR AS  LGG GGGG+PD AQ GG D +K  EA+
Sbjct: 820 SDDGKASAVAAVTEDL-TGRFSAVDIVRTASAALGGKGGGGRPDMAQAGGPDGTKAKEAI 878

Query: 883 EAL 885
           EA+
Sbjct: 879 EAV 881