Pairwise Alignments

Query, 217 a.a., DNA-binding response regulator from Bifidobacterium breve UCC2003

Subject, 210 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 85.9 bits (211), Expect = 5e-22
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 13/207 (6%)

Query: 3   IAIVDDDPIVCQSLETILTATGTADVLWTANDGGAAVQQYFASPANHPDILLIDIQMPGK 62
           + I+D  PI+  S+E +L       ++   +D    +      P    D++++DI +PG 
Sbjct: 6   VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPV---DLIIMDIDLPGT 62

Query: 63  DGLDAAREILPKDPAARILFLTTFADKDYIAQAMALGAKGYLIK-QDVAAVGPALQAVMA 121
           DG    + I       ++LFL++ ++  Y  +A+  GA G++ K  D   +  A+Q +++
Sbjct: 63  DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122

Query: 122 GQVVLGAEILGKLTERTTNPADSSNSGNANDSATKLLNDREREIAMLVAKGLDNRDIAAK 181
           G     +E L  +          SN  + N S   +L++RE  I   +  GL N++IA K
Sbjct: 123 GYTFFPSETLNYI---------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173

Query: 182 LFLSEGTVRNRISVILDKLGLTNRTQL 208
           L LS  TV    S I  KLGL +  +L
Sbjct: 174 LLLSNKTVSAHKSNIYGKLGLHSIVEL 200