Pairwise Alignments

Query, 394 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 405 a.a., ROK family transcriptional regulator from Pectobacterium carotovorum WPP14

 Score =  104 bits (260), Expect = 4e-27
 Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 42/352 (11%)

Query: 27  IRANNTMAVFNLLFPATHMSRVELKRHIGLSRMAISKVTEEMTDHRIIRETGIDNRTGRG 86
           I+  N  AV+ L+     +SR+EL +   L+  +I+K+  E+ +  +++ET   +   RG
Sbjct: 13  IKQMNAGAVYRLIDKYGPISRIELSKRAQLAPASITKIVRELLEAHLVQETEYQDVGSRG 72

Query: 87  KRSTVLAIDTAYWRVIAIDLTQSFVIRGALVDLCGRIVQRVESTVETTGAIT---IDDVI 143
           + +  L +DT  W  ++  ++ + ++  AL DL  ++V  VE  +    A     +D ++
Sbjct: 73  RPAIGLILDTEAWHYLSARISHNTLLL-ALRDLSSKLV--VEEEIPLPAASPQPLLDRIL 129

Query: 144 ALIGR--LRSISDLPTL-GVGVALPGIVD-SEGTVLNAVHLGWSHLPLRARLEEALGLPV 199
             I +  +R    L  L  + +  PG++D S+G +          + +   LE+  GLPV
Sbjct: 130 NEIDQFFIRHQKRLERLTAIAITAPGMIDASKGIIHRMPFYDVEEMAIGPALEQRTGLPV 189

Query: 200 SVNNSTRMALIAERFFGEGSP--NSLLVRIGQGVGAALCVNDEVVDGQAFTAGEIGHITI 257
            + +      +AE  +G      N + V I   VGA +     ++  ++    EIGH  +
Sbjct: 190 YLQHDICAWTMAEALYGASRDCQNVIQVVIDHNVGAGVITGGRILHARSRNLVEIGHTQV 249

Query: 258 DPTGPVCACGRPGCLETFLS----------------SSRLHA--MIAEN--------PQR 291
           DP G  C CG  GCLET  S                SS LH   +  EN         Q 
Sbjct: 250 DPYGKRCYCGNHGCLETVASTENMLELAQQRMNTSMSSLLHGSPLSVENLCDAALKGDQL 309

Query: 292 RTQILSEAGQTLGRVLAIPAGLLDLDNIAVYGP----PEIVSEAFLGSMNEE 339
              I+++ G  +GR++AI   L + D I V  P      I+  A LG + ++
Sbjct: 310 AKDIINDVGHNVGRIVAIMVNLFNPDKILVGSPLNKAASILHPAILGCIQQQ 361