Pairwise Alignments

Query, 394 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 404 a.a., ROK family transcriptional regulator from Bifidobacterium breve UCC2003

 Score =  102 bits (255), Expect = 1e-26
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 12/278 (4%)

Query: 19  ATKTVPSDIRANNTMAVFNLLFPATHMSRVELKRHIGLSRMAISKVTEEMTDHRIIRETG 78
           A  T  + +  +N   +   L+     SR ++ + + L+  AI+K+T  + +  +I ETG
Sbjct: 6   ARATSQASVSESNRSRIVKHLYHNGISSRAQIAKALELTPAAITKITARLIEAGMIEETG 65

Query: 79  IDNRTGRGKRSTVLAIDTAYWRVIAIDLTQSFVIRGALVDLCGRIVQRVESTVETTGAIT 138
            D    + +RS  L IDTA +RVI +   +  V  G   DLCG  +      +      T
Sbjct: 66  -DLEGSKNRRSIGLKIDTARFRVIGVKFARPLVQIGVF-DLCGNALST--ENLPPVYDHT 121

Query: 139 IDDVIALIGRLRS--ISDLPTL-GVGVALPG--IVDSEGTVLNAVHLGWSHLPLRARLEE 193
           I D I  I +  S  + D P++  +G+A+PG  + +   T + +    W  +        
Sbjct: 122 ISDTITAIHQRISELLDDDPSIVAIGMAVPGPYLRNVGRTAVVSSMQSWRKINFINEFST 181

Query: 194 ALGLPVSVNNSTRMALIAERFFGEG-SPNSLLVR--IGQGVGAALCVNDEVVDGQAFTAG 250
           A  +PV +    R   +A   F      N  L    +G+GVG  +  N  +V+G    A 
Sbjct: 182 AFRVPVFIEQDARAGALAHYLFDPAFHTNDYLAYYLVGEGVGLGVIDNGHLVNGAQGAAT 241

Query: 251 EIGHITIDPTGPVCACGRPGCLETFLSSSRLHAMIAEN 288
           EIGHI++D  G  C CG  GCLE + S+  +H M+ E+
Sbjct: 242 EIGHISVDVNGKPCDCGNVGCLERYCSAPVIHDMLIED 279