Pairwise Alignments

Query, 299 a.a., diaminopimelate epimerase from Bifidobacterium breve UCC2003

Subject, 257 a.a., diaminopimelate epimerase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 81/269 (30%), Positives = 111/269 (41%), Gaps = 49/269 (18%)

Query: 9   KTHATGNDFVVYLDKTGDF-EPTADEIRFLCDRHFGIGGDGLIRLTKPEFVSDLSDEQIM 67
           K   TGNDFV+  D++  F E     +  LCDR FGIG DGLI +   E           
Sbjct: 7   KYQGTGNDFVMIDDRSAHFDEKNLKLVSQLCDRKFGIGADGLILIRNKE----------- 55

Query: 68  AVQAGDAEWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRAGVKILTP 127
                  ++ M Y NADGS + MCGNG R    F+   G+      F             
Sbjct: 56  -----GYDFEMIYYNADGSQS-MCGNGARCAVAFSSFLGIVTEEAHF------------- 96

Query: 128 RGNVKPYGANVFQVEMGEWKIGETDAYEVTIPGNDGSARGTFVDMGNPHVVAVIEDAFST 187
              +   G +  ++E G   +G  D   +    +D      +V+ G+PH V  ++D    
Sbjct: 97  ---LAIDGPHDARIEDGNIALGMGDVTAIERVDDD-----FYVNTGSPHHVRFVKDV-EN 147

Query: 188 LPVVEDLDLVTKPVVNPTIESDQNVEFVRIDDIDHNTAVGEATMRVNERGC-GETLSCGT 246
            PVV+    +     +       NV FV     DH        +R  ERG   ETLSCGT
Sbjct: 148 YPVVDTGASIRYS--DHYTPKGTNVNFVSTLAEDH------IYVRTYERGVEDETLSCGT 199

Query: 247 GLCATGIVLRAKTGISHWDITVRGGTLRV 275
           G+ A  ++   + GI H  I   GG L V
Sbjct: 200 GVTACALIYGDQKGIDHIKIKALGGNLAV 228