Pairwise Alignments

Query, 407 a.a., carbamoyl-phosphate synthase small subunit from Bifidobacterium breve UCC2003

Subject, 364 a.a., carbamoyl-phosphate synthase, small subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  301 bits (771), Expect = 2e-86
 Identities = 174/389 (44%), Positives = 220/389 (56%), Gaps = 27/389 (6%)

Query: 15  DKDDAVLVLEDGQVYVGEPYGALGETTGEIVFATGMTGYQETLTDPSYDRQIVVQTFPHI 74
           DK  A L+LEDG V+ G   G  G   GEI F TGMTGYQE  TDPSY  QIVV T  HI
Sbjct: 2   DKQKATLLLEDGTVFYGTLIGKHGTNGGEICFNTGMTGYQEIYTDPSYTGQIVVTTTSHI 61

Query: 75  GDTGVNSEDPESSRIWVAGYIVRDPSPNVSNWRAEGSLDDDLVKNGIVGLSHIDTRKLVR 134
           G+ GV   + ES    +A  +V   S   S   A  SL + L  NGI G++ +DTRKLVR
Sbjct: 62  GNYGVIDSEAESDGPTIASIVVNSFSEIYSRLDATQSLQEFLESNGITGIADVDTRKLVR 121

Query: 135 HLRSAGVMRAGIFSGEALVDAATGKLKTIEQLLEDVKNTPPMQGLSLYDEVSTKETYTIE 194
           H+RS G M A I S          +   +E L +++   P M GL L  +V TKE Y   
Sbjct: 122 HIRSKGAMNAIISS----------EFDNLEDLQKELDKVPDMAGLELSSKVCTKEPY--- 168

Query: 195 PCGEYEGKE-PLYTVAAVDLGIKGMTPHRMAERGCRVHVVPSTITFAELEALNPDGVFFS 253
               Y G E     VA VD GIK      +A RG    V P+    A++EA  P+  F S
Sbjct: 169 ----YVGDENSTIKVACVDYGIKRNILRNLAARGVYCKVFPAKTAVADMEAWQPNAYFLS 224

Query: 254 NGPGDPEQAGPEIELLRQVLDAGYPFFGICFGNQLLGRALGFGTYKLKFGHRGINQPVKD 313
           NGPGDP      +E ++++L    P FGIC G+QLL  A+G  TYK+  GHRGIN P+K+
Sbjct: 225 NGPGDPAVMDYAVETVKEILALNKPVFGICLGHQLLAEAVGIKTYKMHHGHRGINHPIKN 284

Query: 314 LTTGKVEVTAHNHGFAVDAPIGKQVDAPFENGKYGKVFVSHIDLNDDVVEGLQCVDIPAF 373
           L TGK E+T+ NHGF +       V    EN  +  + ++H+ LND+ V G++  D PAF
Sbjct: 285 LNTGKSEITSQNHGFNI-------VREDSEN--HPDIEITHVHLNDNTVAGIKLKDRPAF 335

Query: 374 SVQYHPEAAAGPHDAAYLFDRFCELMKNN 402
           SVQYHPE+A GPHD+ YLFD F  L+ NN
Sbjct: 336 SVQYHPESAPGPHDSRYLFDDFISLINNN 364