Pairwise Alignments

Query, 639 a.a., DNA helicase RecQ from Bifidobacterium breve UCC2003

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  421 bits (1082), Expect = e-122
 Identities = 243/627 (38%), Positives = 360/627 (57%), Gaps = 45/627 (7%)

Query: 11  LKQYFGYDSFRPGQQGIVDALLDGRDVLGVMPTGAGKSVCYQIPAALMPGVTIVISPLIS 70
           LK ++GYDSFR  Q+ I+ ++L  +D + +MPTG GKSVCYQIPA +  G+T+VISPLI+
Sbjct: 8   LKNFYGYDSFRGQQEAIIQSILKQQDTIVLMPTGGGKSVCYQIPAMVNDGLTLVISPLIA 67

Query: 71  LMRDQVDALNDLGLPAAFVNTTQTPDEQAMVFAQAAAGQLKLLYVAPERLETGRF--RDF 128
           LM+DQVDALN +G+PAA++N++Q+  EQ  V  +  +G+LKLLYVAPERL  G F   + 
Sbjct: 68  LMKDQVDALNGMGIPAAYLNSSQSASEQRFVSEEIRSGKLKLLYVAPERLFGGAFPLTET 127

Query: 129 AARTPISLIAVDEAHCVSQWGQDFRSSYLGIGDFIVGLPKRPPVGAFTATATERVRRDIV 188
              + +SL+A+DEAHCVSQWG DFR  YL IG     LP  P V A TATA ++ R DI 
Sbjct: 128 LKTSRLSLVAIDEAHCVSQWGHDFRPDYLMIGRLRQELPDVPFV-ALTATADKQTRADIA 186

Query: 189 GLLGLRNPAVTVTGFDRPNLYFDVVKLETKYKAAWVANYVAAHPDESGIIYCATRKTTEA 248
             LGLR P   ++ FDRPN+ + +V     ++   + +++  H   SGIIYC +RK  E 
Sbjct: 187 DKLGLRKPKWFISSFDRPNITYRIVPKRNSFEK--LLDFLEYHQKNSGIIYCLSRKNVED 244

Query: 249 LAATLNQMGHAAVAYHGGMSSDAREAAQHDFITDKVPVVVATNAFGMGIDKSDVRYVIHH 308
           +A  L   G +A+ YH G+    R + Q  FI DKV ++VAT AFGMGIDKS+VR+V+H 
Sbjct: 245 MAGRLQAAGLSALPYHAGLDRQTRASHQEKFIKDKVKIMVATIAFGMGIDKSNVRFVVHM 304

Query: 309 NLPESIEAYYQEAGRAGRDGEPSRCTLLWNESDIVTRRRLLDSDYENERMTPEDQEIVRQ 368
           N+P++IE YYQE GRAGRDG PS   L ++ +D++T +R++D+        P+  E++  
Sbjct: 305 NMPQNIEGYYQETGRAGRDGLPSDALLFYSYADVMTLQRMIDTP-----DNPDYSEVMLA 359

Query: 369 SKRRLLDGMVGYCRTADCLHRYMTRYFGQEITPTDAPSDTHEGKCGACSNCESTFETIDV 428
                L+ M  +C++  C  RY+  YF +E           +  CG C  C S     D+
Sbjct: 360 K----LEKMKQFCQSNTCRRRYLLGYFDEE----------EQKDCGNCDRCLSKDNKQDM 405

Query: 429 TSVAQAISRCVHDVNQRVGSGKIVKILRGSKAQDLAWLNPEQMPTFGMLKDVNEARVRDV 488
           T  AQ +   +  + +  G G  V +LRGSK+  +     + +  +G+ K+ +E   + +
Sbjct: 406 TVPAQMLLSTIVRLKENYGLGYCVLVLRGSKSAKVQ-EEHKALTVYGIGKEKSEDFWKKL 464

Query: 489 LSQMATDGYLFIAEGRMPIVMFGARAAETAASDFHYEIKRVERKSASVSSRHGGVASESA 548
              +  +GYL  A  + P +     A E          K   +K   +    GG   +  
Sbjct: 465 GQHLQQEGYLAEAGTQFPTLKLTTIAWE----------KLKGKKKFLLQMGEGGFDHQPT 514

Query: 549 SASVAMESYIPDDDEEALFQKLRELRRTIAQEIGKPPYIVFSDKTLRDMARIKPITNAQF 608
           + +           EE LF++L+ +R  +AQ+   PPY++FSD TL +MA+  P  +  F
Sbjct: 515 TVAY----------EEGLFEELKRIRFGLAQKENVPPYVIFSDNTLVEMAQYLPHDHDSF 564

Query: 609 LAVNGVGQHKLDLYGKRFMEAVASFNA 635
           L ++GVGQ K + Y   F+  + S+ A
Sbjct: 565 LQISGVGQRKAENYEDHFLPVIKSYAA 591