Pairwise Alignments

Query, 328 a.a., LacI family DNA-binding transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 341 a.a., Transcriptional (co)regulator CytR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  132 bits (332), Expect = 1e-35
 Identities = 110/332 (33%), Positives = 162/332 (48%), Gaps = 12/332 (3%)

Query: 1   MQDVAKAAGVSPQTVSRVANDSNAVKPETRQRVEAAMERLGYRPNYAARALKHGRFQDIG 60
           M+DVA  A VS  TVSR   + + V   TR RVE A   +GY P    R +K    + I 
Sbjct: 12  MKDVALKAKVSTATVSRALMNPDKVSQSTRSRVEQAALEVGYFPQSMGRNVKRNESRTIL 71

Query: 61  VVMFDTTRFGNARILDSIVTHAAEDGYSVTIQTMS--NGAERTLASAIDRMQRQPVDGVI 118
           V++ D      + I+  I   AAE GY V I   +  N  E+T  + I   Q   +DG +
Sbjct: 72  VIVPDICDPFFSEIIRGIEVTAAEQGYLVLIGDCAHQNQKEKTFLNLIITKQ---IDG-M 127

Query: 119 VVLEERISDFVGYKPPRELPVVLISEAAAD--HCPTVDADQYGCSTAIVDYLMSKGHKTV 176
           V+L  R+      +  R LP +++S   A     PTV  D    +   ++YL+  GHK +
Sbjct: 128 VLLSSRLPFDASVEEQRNLPPMVMSNEFAPELELPTVHIDNLTAAFNAMNYLLDLGHKRI 187

Query: 177 YHIAGPVTSRAAESRAQGWREALEQIGARVPSMYI--GDWCADSGYQAGVALAHDP-ECT 233
             IAGP        R QG+ +AL + G  V   YI  GD+  ++G  A   L   P   T
Sbjct: 188 GCIAGPEDMPLCHYRLQGYVQALRRSGIVVDPHYIARGDFTFEAGANALKQLLEQPLPPT 247

Query: 234 AIYAANDQMAYGAMLGLESAGKRVPEDVSIVGVDDSLVDVVPRLNLTTMRMRNDAIGATA 293
           A++  +D MA GA+   +  G +VP+D+SI+G D+  +       LTT+      IG  A
Sbjct: 248 AVFCHSDVMALGALSWAKRQGLKVPDDLSIIGFDNIALAEFCDPPLTTVAQPRFDIGREA 307

Query: 294 FSMVRRQCEGEKVPAGIKTVIPTELIKRGSVR 325
             ++  Q +G+ V +G + ++  ELI RGS R
Sbjct: 308 MLLLLDQMQGQNVSSGSR-LMDCELIIRGSTR 338