Pairwise Alignments

Query, 285 a.a., ribonuclease HII from Bifidobacterium breve UCC2003

Subject, 198 a.a., ribonuclease HII (NCBI) from Escherichia coli BW25113

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 87/264 (32%)

Query: 19  LIVGFDEVGRGALAGPVMVGCAAIWARDLKPDADGELAQADGSAASSRVSGDNGTDAGVI 78
           L+ G DEVGRG L G V+     +                                    
Sbjct: 11  LVAGVDEVGRGPLVGAVVTAAVIL------------------------------------ 34

Query: 79  TPDPAPYLSVPAGVADSKMLTEHRREAIFDELCSWCAAYAVGQASNAEIDEWGITYALGV 138
             DPA  +   AG+ DSK L+E RR A+++E+     ++++G+A   EIDE  I +A  +
Sbjct: 35  --DPARPI---AGLNDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATML 89

Query: 139 AALRALNQVERDLGVGSEFGSPREGSCLTATEGKPLPSRRPITIGAILDGPSDYITKALN 198
           A  RA+      L +  E+                           ++DG          
Sbjct: 90  AMQRAV----AGLHIAPEY--------------------------VLIDGNR-------- 111

Query: 199 TFDAPDVPIPADVTTKVKGDQHCATVATAAVIAKVTRDRLMVSIAQGNPRYAAYEWDHNK 258
               P +P+PA     VKGD     ++ A+++AKVTRD  M ++    P+Y    +  +K
Sbjct: 112 ---CPKLPMPAMAV--VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYG---FAQHK 163

Query: 259 GYGSAAHRAAIAEYGPTPLHRTSW 282
           GY +A H   +AE+G T  HR S+
Sbjct: 164 GYPTAFHLEKLAEHGATEHHRRSF 187