Pairwise Alignments

Query, 911 a.a., valine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 952 a.a., valine--tRNA ligase from Dickeya dadantii 3937

 Score =  249 bits (635), Expect = 8e-70
 Identities = 223/900 (24%), Positives = 369/900 (41%), Gaps = 127/900 (14%)

Query: 32  WDEDGTYKFRNTRDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYP 91
           W++ G +K      +++ +SI  PPP V+GSLH+GH F  T  D + RY+RM+G +  + 
Sbjct: 18  WEKQGYFKPHGDTSQES-FSIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQ 76

Query: 92  MGWDDNGLPTERRVQNYYGVRVDVSLPYDPDFKPPFEGTDGKKIDAKDQVPISRKNFIEL 151
            G D  G+ T+  V+                             + K +    R  FI+ 
Sbjct: 77  AGTDHAGIATQMVVERKIAAE-----------------------EGKTRHDYGRDAFIDK 113

Query: 152 CEKLTAEDEKLFEALWRKLGLSIDWSQTYHTIGQHPRRVAQKAFLRNLARGEAYQQDAPG 211
             +  AE         R+LG S+DW +   T+        ++ F+R       Y+     
Sbjct: 114 IWQWKAESGGTITRQMRRLGNSVDWERERFTMDDGLSNAVKEVFVRLYKEDLIYRGKRLV 173

Query: 212 LWDVTFQTAVAQAELESREYPGFYHKVAFRFEDGTP-------IYIETTRPELLAACTSL 264
            WD   +TA++  E+E+R+  G    + +   DG         + + TTRPE +   T +
Sbjct: 174 NWDPKLRTAISDLEVENRDVKGSMWHLRYPLADGAKTADGNDYLVVATTRPETVLGDTGV 233

Query: 265 IANPNDERYKQYFGQEVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWRDL 324
             NP D RYK   G+ +  PL   ++PI+    A+M+KG G        D  D E  +  
Sbjct: 234 AVNPEDPRYKDLIGKFLILPLVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRH 293

Query: 325 KLPTRPIIQRNGRIVMDTPDWITDPAGREVFAET-----AGKTTFSARKVIVDKLRESGD 379
           +LP   I+  +G I  +   + T+      ++        G   F+ARK IV    E G 
Sbjct: 294 QLPMINILTFDGDIRQEAEVFSTNGEASTAYSSDIPEAFRGLERFAARKAIVAAFDELGL 353

Query: 380 LDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDEKLNAELIERGKELNFHPDFMR 439
           L+ E         + ++G   +E + + QWY++  G   K   E +E G+ + F P    
Sbjct: 354 LE-EIKAHDLTVPYGDRGGVVIEPMLTDQWYVR-AGVLAKPAVEAVEDGR-IQFVPKQYE 410

Query: 440 VRYENWVHGLNGDWLISRQRFFGVPFPLWYPVNASGEPDYDRPITPSEDRLPIDPTIDVP 499
             Y +W+  +  DW ISRQ ++G   P WY  N       D      ++ L  D  +   
Sbjct: 411 NMYFSWMRDIQ-DWCISRQLWWGHRIPAWYDDNGKVYVGRDEAEVRRDNNLSADVALH-- 467

Query: 500 EGYDESQRDVPGGFTAEKDIMDTWATSSVTPQIVTHWAEPDEASQALFKSTFPMDLRPQG 559
                           ++D++DTW +S +       W  P++  +   K+  P  +   G
Sbjct: 468 ---------------QDEDVLDTWFSSGLWTFSTLGW--PEQTPE--LKAFHPSSVMVSG 508

Query: 560 QDIIRTWLFSTV------DRAHLENKCLPWAHATLSGWILDPDHKKMSKSKGNVVVPNE- 612
            DII  W+   +       +       +P+    ++G I D + +KMSKSKGNV+ P + 
Sbjct: 509 FDIIFFWIARMIMLTMHFIKDEDGKPQVPFHTVYMTGLIRDEEGQKMSKSKGNVIDPLDM 568

Query: 613 ------------------------------------PIEKFGADAVRY-WAAAARLGLDA 635
                                                IE  G DA+R+  AA A  G D 
Sbjct: 569 VDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDI 628

Query: 636 TYDIGQMKIGRRLAIKLLNATKFALAIGREDENHHVGEAAEASWNPADVTEPLDRAAMAK 695
            +D+ +++  R    KL NA++F L +  ED++       E       V    DR  +A+
Sbjct: 629 NWDMKRLEGYRNFCNKLWNASRFVL-MNTEDQDCGFTGGGE------KVLSLADRWILAE 681

Query: 696 LALVVRQATEALEAYEHSKALEVIESYFW-QFCDDYIELVKNRAYGTPDEQGNVPSEKAV 754
               V+   EAL+ Y    A  V+  + W QFCD Y+EL K    G  D +        +
Sbjct: 682 FNRTVKTYREALDGYRFDLAANVLYEFTWNQFCDWYLELTKPVMTGGSDAE--------L 733

Query: 755 KSARTALGLGLDAFARLLAPYLPYASEEVWSWMHAGSG----SVHRAAWPVVDPYVEAAT 810
           +  R  L   L+A  RL  P +P+ +E +W  +    G    ++    +P  D  +E   
Sbjct: 734 RGTRHTLVTVLEALLRLAHPIIPFITETIWQRVKVLKGVTDDTIMLQPFPAFDATLEDEQ 793

Query: 811 GASPELLTWAGKAVEQLRKIKSEAKVSMKTPILSVALSAAAEGVDAIHAALGDIAQAGRV 870
             +   L W  +A+  +R I++E  ++   P+  +   A+A+    +   LG I    R+
Sbjct: 794 AFND--LEWIKQAIVAVRNIRAEMNIAPSKPLTLLLRDASADATRRVQDNLGFIQTLARL 851