Pairwise Alignments

Query, 421 a.a., signal recognition particle-docking protein FtsY from Bifidobacterium breve UCC2003

Subject, 491 a.a., Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  263 bits (671), Expect = 1e-74
 Identities = 153/379 (40%), Positives = 223/379 (58%), Gaps = 26/379 (6%)

Query: 45  DKRTRDAKAAADARLTAEAEAAKESEKAGGAAAGTAATGKSTADAESVSPAAKPAVAEST 104
           ++   +A    D  L A+A AA+ +E+A                   V PA + A  E+ 
Sbjct: 134 EEEGENAAKFTDEELEAQALAAQAAEEA----------------VMVVPPAEEDAPVEAI 177

Query: 105 AEPAKTETPESVGSRLTRLKAKLAKSGNPFGKALFDILAKDNLSESDWEDVEDTLLLADV 164
            +  +  T E       RLK  L K+    G     +     + +  +E++E+ LL+ADV
Sbjct: 178 VQEQEKPTKEGF---FARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADV 234

Query: 165 GAEASAQLVDDLKTDARITGKADPAEVRATLKDKLLDLVGRDTDRRLNVEKPGANKPGVI 224
           G E + +++ +L   A      D   +   LKD++ +++ +  D  LN+E      P VI
Sbjct: 235 GVETTRKIIANLTEGASRKQLKDAEALYGLLKDEMGEILAK-VDEPLNIE---GKTPFVI 290

Query: 225 IMVGVNGTGKTTTAGKLARLFVSEDKQVIMGAADTFRAAAADQLETWGTRVNVPVVRADK 284
           +MVGVNG GKTTT GKLAR F  + K V++ A DTFRAAA +QL+ WG R N+PV+ A  
Sbjct: 291 LMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVI-AQH 349

Query: 285 DGADPASVAFEASAKAKEANADVLIIDTAGRLQNKANLMDELGKIRRVTEK--NLPVDEV 342
            GAD ASV F+A   AK  N DVLI DTAGRLQNK++LM+EL KI RV +K       EV
Sbjct: 350 TGADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEEAPHEV 409

Query: 343 LLVLDATTGQNGMAQAKVFAEAIGITGVVLSKLDGSAKGGIVISVQKELGVPVKLVGLGE 402
           +L +DA+TGQN ++QAK+F EA+G+TG+ L+KLDG+AKGG++ SV  + G+P++ +G+GE
Sbjct: 410 MLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGE 469

Query: 403 GPDDLAPFDPEGFVDGILA 421
             +DL PF  + F++ + A
Sbjct: 470 RIEDLRPFKADDFIEALFA 488