Pairwise Alignments

Query, 350 a.a., LacI family transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 361 a.a., LacI family transcriptional regulator from Bifidobacterium breve UCC2003

 Score =  398 bits (1022), Expect = e-115
 Identities = 210/367 (57%), Positives = 262/367 (71%), Gaps = 23/367 (6%)

Query: 1   MVGMRDVAKTAGVSLSTVSLVVNNTGYVSDDMRAKVEAAMRQLNYIPNELARNLYRNRTN 60
           MVGMRDVAK AGVSLSTVSLVVN  GYVSDDMR +V  AM+ LNY+PNELARNLY +RTN
Sbjct: 1   MVGMRDVAKKAGVSLSTVSLVVNGNGYVSDDMRERVRKAMQLLNYVPNELARNLYHDRTN 60

Query: 61  TIGVIMPTIAHPFFATLTAHLQREFAARDLKTLLCSIADADKGEGEYVDMLQRHMMDGIV 120
            +GVI+PTI HPFFAT TAHLQ   AA+ L+T+LCS AD   GE +YVDML+RHMMDGIV
Sbjct: 61  LVGVIVPTIRHPFFATFTAHLQHALAAQGLRTMLCSTADEADGEIQYVDMLRRHMMDGIV 120

Query: 121 MAAHTEHPGGYWTSIHRPIVAFDRTLGEGVPAVRSDHEQGGRLIARQLIDSGARHVVLVG 180
           M AHT HPG YWTSIHRPIVAFDR LG+G+ ++ SDHEQGGRLIA+ LI +GA+HVV++G
Sbjct: 121 MCAHTSHPGDYWTSIHRPIVAFDRVLGDGISSIGSDHEQGGRLIAQMLIRNGAKHVVMIG 180

Query: 181 GPRSQFAE---------------ATTFPTIRYHLTVERMLADAGIACDYVEAGIVADICA 225
           GPR QF +                TTFPT+RY+LT+E+ L  AG+  +YVEAG V D   
Sbjct: 181 GPRDQFFDLAARGEVEEGPFDLGKTTFPTVRYYLTLEQELTSAGVKYEYVEAGEVMDFAG 240

Query: 226 -HEATARAIFERYSD-VDAIVGSDLVASVALQEALRRGISVPRDLQIIAYDGTFMAETAG 283
            H A + A+ +  +D VDA+V SD+ AS  ++EAL RGI++P +LQI+AYDGT++ + AG
Sbjct: 241 YHRAVSNALDKVTTDGVDAVVSSDIGASFCVREALSRGIAIPDELQIVAYDGTYLTDLAG 300

Query: 284 MRLTAVRQDFPAVAAALASRMDSQIAADNGTTSAAAAEGGNAVAANGGQSTSEDIISVTL 343
           M+LTAV QDF A+A + A  +   IA +      AAA           +     +I +TL
Sbjct: 301 MKLTAVAQDFSAIAQSTADHIVQAIANE----EVAAANASRRDIPKPFEPNV--LIPMTL 354

Query: 344 IPGETTR 350
           +PG+TTR
Sbjct: 355 VPGDTTR 361