Pairwise Alignments

Query, 337 a.a., LacI family DNA-binding transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 341 a.a., Transcriptional (co)regulator CytR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 41/348 (11%)

Query: 3   TIREIAQRAGFSPATVSR-LLNGDPTLSVKEETRRKILQVCEELGY--ETQDRRLVAPHD 59
           T++++A +A  S ATVSR L+N D    V + TR ++ Q   E+GY  ++  R +     
Sbjct: 11  TMKDVALKAKVSTATVSRALMNPD---KVSQSTRSRVEQAALEVGYFPQSMGRNVKRNES 67

Query: 60  IAVLDAIPSDEELSNAYYSEL-RSTLLSTAQQMHITL---------SFYTDINKLIDNST 109
             +L  +P   ++ + ++SE+ R   ++ A+Q ++ L            T +N +I  + 
Sbjct: 68  RTILVIVP---DICDPFFSEIIRGIEVTAAEQGYLVLIGDCAHQNQKEKTFLNLII--TK 122

Query: 110 QYDGFVSIGPELHSYESLERLHEVLPHGVFIDVNPAPNLFSSVQPDLPQTILDALSEARA 169
           Q DG V +   L    S+E    + P  +  +  P   L  +V  D      +A++    
Sbjct: 123 QIDGMVLLSSRLPFDASVEEQRNLPPMVMSNEFAPELEL-PTVHIDNLTAAFNAMNYLLD 181

Query: 170 RGMTRIGFIGGEGRMMGTYEYPEDIRTMAYRDWCERLGLETAGLI-----FTGGQVSVKT 224
            G  RIG I G          PED+    YR       L  +G++        G  + + 
Sbjct: 182 LGHKRIGCIAG----------PEDMPLCHYRLQGYVQALRRSGIVVDPHYIARGDFTFEA 231

Query: 225 GRKHGETIVAKLSSNMPDCFIVA-TDSLAVGVIQAFTKAGILVPRDVSIISINNQSIAQY 283
           G      +   L   +P   +   +D +A+G +    + G+ VP D+SII  +N ++A++
Sbjct: 232 G---ANALKQLLEQPLPPTAVFCHSDVMALGALSWAKRQGLKVPDDLSIIGFDNIALAEF 288

Query: 284 ISPPLTTYAIDQTALARNALLMLSQSISFNDDITCHTMISTKLVARES 331
             PPLTT A  +  + R A+L+L   +   +  +   ++  +L+ R S
Sbjct: 289 CDPPLTTVAQPRFDIGREAMLLLLDQMQGQNVSSGSRLMDCELIIRGS 336