Pairwise Alignments

Query, 337 a.a., LacI family DNA-binding transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 327 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  128 bits (321), Expect = 2e-34
 Identities = 96/337 (28%), Positives = 173/337 (51%), Gaps = 22/337 (6%)

Query: 1   MVTIREIAQRAGFSPATVSRLLNGDPTLSVKEETRRKILQVCEELGYETQDRR-----LV 55
           M T+++IA  AG S ATVSR+LN DPTL+VKEET+ +IL++ E+L Y+T   R      V
Sbjct: 1   MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAV 60

Query: 56  APHDIAVLDAIPSDEELSNAYYSELRSTLLSTAQQMHITLSFYTDINKLIDNSTQYDGFV 115
             H I  + +   + E+++ YY  +R  + +  +++ I L+   + + L D      G +
Sbjct: 61  NQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPD-IKNVTGIL 119

Query: 116 SIG---PELHSYESLERLHEVLPHGVFIDVNPAPNLFSSVQPDLPQTILDALSEARARGM 172
            +G   P L +  S      +  +  FID +   + + +V  DL +   + +     +G+
Sbjct: 120 IVGKPTPALRAAAS-----ALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGV 174

Query: 173 TRIGFIGGEGRMMGTYEYPEDIRTMAYRDWCERLGLETAGLIFTGGQVSVKTGRKHGETI 232
            RIGFIGGE           DIR +A+ ++     +     I+ GG  S  +G +  + +
Sbjct: 175 NRIGFIGGEDE-----PGKADIREVAFAEYGRLKQVVREEDIWRGG-FSSSSGYELAKQM 228

Query: 233 VAKLSSNMPDCFIVATDSLAVGVIQAFTKAGILVPRDVSIISINNQSIAQYISPPLTTYA 292
           +A+   + P    VA+DS+A+GV++A  + G+ +P+D+S+IS+N+   A++  PPL+T  
Sbjct: 229 LAR--EDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVR 286

Query: 293 IDQTALARNALLMLSQSISFNDDITCHTMISTKLVAR 329
           I    +    + ++ +       +     + +KL  R
Sbjct: 287 IHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLR 323