Pairwise Alignments

Query, 374 a.a., DNA polymerase III subunit beta from Bifidobacterium breve UCC2003

Subject, 367 a.a., DNA polymerase III subunit beta from Pseudomonas putida KT2440

 Score =  104 bits (259), Expect = 4e-27
 Identities = 91/380 (23%), Positives = 179/380 (47%), Gaps = 23/380 (6%)

Query: 1   MKVEIDTAALADAVAWTSRVIDARPSNPILAGVKLEAIDGTLQFSAFNYEISARHHIEAG 60
           M   I   AL   +   + V++ R + P+L+ V L      L  +  + E+     ++  
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  VD-EVGSALVLGKLLADITKSLRSEKTY-LTTDGSTLTITSGKSKFTLQLMPDAEYPDLP 118
              E G   V  + L DI KSL ++    +  D   L + +G+S+FTL  +P  ++P + 
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVE 120

Query: 119 VVPPMLG-QVDAQTFVQAVNQASVAVSREENRPVLTGVRMQFQDDKVIMTSTDRFRLARA 177
             P  L   ++     + + + S A+++++ R  L G+ ++   + +   STD  RLA  
Sbjct: 121 EGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRNTLRAVSTDGHRLALC 180

Query: 178 AFTWTPQDANVDTITLVRGSLLKDVARSLDEHQNIRLDFDADNPTLLGFENAGRVS---- 233
           + +   +  +   + + R  +L ++AR L + + +          +LG  +    +    
Sbjct: 181 SMSAPIEQEDRHQVIVPRKGIL-ELARLLTDPEGMV-------SIVLGQHHIRATTGEFT 232

Query: 234 -TSQLIDGEFPAVDRLFADEYPIQAVVNKQDLLDAISRVALVA-ERNAPIRMMFTGQELA 291
            TS+L+DG+FP  +R+         V ++Q L +A SR A+++ E+   IR+     +L 
Sbjct: 233 FTSKLVDGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLK 292

Query: 292 LSAGSADEAQANETLDIDMDGDEITVAFNPSYLKEGLSAIAEPFVRIKMTTPVKPVEFNG 351
           + A + ++ +A E + +D +G  + + FN SYL + L  +    VR+ ++          
Sbjct: 293 IQANNPEQEEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALL-- 350

Query: 352 QQEADSDESMDYRYLLVPMR 371
            QEA +D+S    Y+++PMR
Sbjct: 351 -QEAGNDDS---SYVVMPMR 366