Pairwise Alignments

Query, 318 a.a., ferric citrate ABC transporter permease from Escherichia coli BL21

Subject, 338 a.a., hemin ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  194 bits (493), Expect = 3e-54
 Identities = 117/280 (41%), Positives = 170/280 (60%), Gaps = 10/280 (3%)

Query: 46  VLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLLMPS 105
           V+   RLPR LLAL VGA LA  G ++QG+ RNPLA P I+GV+  A+L +   ++L P 
Sbjct: 58  VVSNVRLPRTLLALTVGAILAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVLFPD 117

Query: 106 LPVMVLPLLAFAGGMAGLILLKMLAKTH---QPMKLALTGVALSA-CWASLTDYLMLSRP 161
           +  +++ L AF  G+A  +++  LA        + L L+GVA++A   A +     L+  
Sbjct: 118 VGSLMISLGAFLCGLATTLIVYRLASNGLGTSVVLLLLSGVAIAALAGAGIGVLTYLAND 177

Query: 162 QDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRD---LDLLALGDARATTLG 218
             + +  LW  GS+ G  W +V + + +++L   LS  F RD   L+ L LG+A A  LG
Sbjct: 178 MALRDLTLWQMGSIAGAQWQYVGLCLLVLVL---LSWRFQRDAMALNALLLGEAEARHLG 234

Query: 219 VSVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTGAL 278
           ++V   +   +LL        VAA G I FIGLVVPH++R I G  H+RLLP+SAL GA 
Sbjct: 235 INVDRLKLRLILLCALGVGVSVAATGIIGFIGLVVPHLVRMILGPDHKRLLPMSALLGAA 294

Query: 279 LLVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR 318
           LL +AD+ AR   PP ELPV ++TA+IGAP+F++LL++ R
Sbjct: 295 LLALADIGARTFLPPAELPVSLVTALIGAPFFIFLLLQQR 334