Pairwise Alignments

Query, 318 a.a., ferric citrate ABC transporter permease from Escherichia coli BL21

Subject, 360 a.a., transport system permease protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  212 bits (540), Expect = 1e-59
 Identities = 129/332 (38%), Positives = 194/332 (58%), Gaps = 20/332 (6%)

Query: 5   LVIFITLALAGCALLSLHMGVIPVPWRALLTDW------QAGREHYYVLMEYRLPRLLLA 58
           L +++ + L   +  SL +G      RA + DW       AG +   +L + RLPRL L 
Sbjct: 26  LHLWLWIFLLAVSAFSLGIGAAGAQVRAAVADWIRTGTLDAGAQ--VILFDIRLPRLALG 83

Query: 59  LFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLLMPSLPVM--------V 110
           L VGAALAVAG ++QG+ RNPLA P I+GV+  A L ++ A++L  +LP          +
Sbjct: 84  LLVGAALAVAGAVMQGLFRNPLADPGIVGVSAGAGLGAILAIVLGAALPAFFIDALGNYL 143

Query: 111 LPLLAFAGGMAGLILLKMLAKTHQPMKLA---LTGVALSACWASLTDYLM-LSRPQDVNN 166
           +PL AFAGG    ILL  ++       +A   L G+AL+A   +L+  L+ ++  + + +
Sbjct: 144 IPLAAFAGGWGSTILLYKVSTRRGRTSVATMLLAGIALAALTGALSGILVYIADDRQLRD 203

Query: 167 ALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLGVSVPHTRF 226
              W  GSL G  W+ V IA PL+ +    +    R L+ +ALG+A A  +GV++   + 
Sbjct: 204 LTFWGLGSLAGATWTKVLIAGPLIAVAFLSAPLLARGLNGMALGEAAAAHMGVALERLKT 263

Query: 227 WALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTGALLLVVADLL 286
            A+L+  + T   VA  G I F+G+VVPH++R   G  HR LLP +AL GA LLV+AD +
Sbjct: 264 GAILIVASATGAAVAVSGGIGFVGIVVPHLLRIAVGPDHRTLLPNAALLGASLLVLADCI 323

Query: 287 ARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR 318
           +R I  P ELP+G++TA++GAP F+W+L+R R
Sbjct: 324 SRTIIAPAELPIGIVTAVLGAPVFLWILLRAR 355