Pairwise Alignments

Query, 318 a.a., ferric citrate ABC transporter permease from Escherichia coli BL21

Subject, 348 a.a., transport system permease protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  179 bits (455), Expect = 7e-50
 Identities = 119/334 (35%), Positives = 184/334 (55%), Gaps = 32/334 (9%)

Query: 10  TLALAGCALLSLH------MGVIPVP----WR--------ALLT-DWQAGREHYYVLMEY 50
           +L +AG A+L L       +G + VP    W          LLT DW  G+    ++ E 
Sbjct: 18  SLTVAGVAVLLLSISVAVSLGAVAVPLGTVWGIMADRILPGLLTPDWTTGQAA--IVWEI 75

Query: 51  RLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLLMPS-LPVM 109
           RLPR LLA  VGA LA+ G  +Q + RNPLA P +LG++  A+  ++ ALL     L ++
Sbjct: 76  RLPRALLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFGAILALLHTGLFLGLL 135

Query: 110 VLPLLAFAGGMAGLILLKMLAKTHQPM---KLALTGVALSACWASLTDYLM-LSRPQDVN 165
            +PLLAFAG +A  +L+  +    Q     +L L GVA+S    S  + L+ +  P+  +
Sbjct: 136 TVPLLAFAGALAATLLVLGVTSFAQATGADRLVLAGVAVSFIVMSCANILIFIGDPRATH 195

Query: 166 NALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRD---LDLLALGDARATTLGVSVP 222
             + W+ G L    W   ++  P +IL +   L F  +   L+ + +GD  A+TLG+ + 
Sbjct: 196 TVVFWMLGGLGLAQWD--QLLFPAVIL-VGCGLWFLANASRLNAMTIGDETASTLGIPIA 252

Query: 223 HTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTGALLLVV 282
             R    ++   +T   VA  G I F+GL++PH++R + GG + R+LP SAL GA+ LV 
Sbjct: 253 RFRLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVGGDYARVLPASALVGAIFLVW 312

Query: 283 ADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVR 316
           AD+ AR +  P ++P+G++T +IG  +FVWLL R
Sbjct: 313 ADIAARTVMAPEDIPIGIVTGLIGGAFFVWLLRR 346