Pairwise Alignments

Query, 318 a.a., ferric citrate ABC transporter permease from Escherichia coli BL21

Subject, 338 a.a., transport system permease protein (RefSeq) from Shewanella sp. ANA-3

 Score =  190 bits (482), Expect = 5e-53
 Identities = 114/280 (40%), Positives = 168/280 (60%), Gaps = 10/280 (3%)

Query: 46  VLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLLMPS 105
           V+   RLPR LLAL VGA LA  G ++QG+ RNPLA P I+GV+  A+L +   ++  P 
Sbjct: 58  VVSNVRLPRTLLALAVGAMLAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVQFPH 117

Query: 106 LPVMVLPLLAFAGGMAGLILLKMLAKTH---QPMKLALTGVALSA-CWASLTDYLMLSRP 161
              +++ + AF+ G+   +++  LA +      + L L+GVA++A   A +     L+  
Sbjct: 118 AESVMISVSAFSSGLITTLIVYRLASSALGTSVVLLLLSGVAVAALAGAGIGVLTYLAND 177

Query: 162 QDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRD---LDLLALGDARATTLG 218
             + +  LW  GS+ G  W +V + + ++ L   LS  F RD   L+ L LG+A A  LG
Sbjct: 178 MALRDLTLWQMGSIAGAQWQYVGLCLVVLAL---LSWQFNRDAKALNALLLGEAEARHLG 234

Query: 219 VSVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTGAL 278
           + V   +   +LL        VAA G I FIGLVVPH++R + G  H+RLLP+SAL GA 
Sbjct: 235 IDVDSLKLRLILLCALGVGVSVAATGIIGFIGLVVPHLVRMLLGPDHQRLLPMSALLGAA 294

Query: 279 LLVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR 318
           LL +AD+ AR   PP ELPVG++TA+IGAP+F++LL++ R
Sbjct: 295 LLALADIGARAFLPPAELPVGLVTALIGAPFFIFLLLQQR 334