Pairwise Alignments

Query, 331 a.a., putative sugar ABC transporter permease from Escherichia coli BL21

Subject, 323 a.a., ribose ABC transporter permease from Pantoea sp. MT58

 Score =  170 bits (430), Expect = 5e-47
 Identities = 117/308 (37%), Positives = 163/308 (52%), Gaps = 17/308 (5%)

Query: 3   KRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGID 62
           K  + LM+ I V         +Q P F +   + NIL   +   I+AVGMT VIL+ GID
Sbjct: 22  KSLIALMVLIAVVA-------SQSPNFFTVANLFNILQQTSVNAIMAVGMTLVILTSGID 74

Query: 63  LSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLA 122
           LSVGS++A TG   A ++G   ++ L+A    L +G A G   G ++   K+ AFI TL 
Sbjct: 75  LSVGSLLALTGAVGASLVG-MEVNALVAVAASLALGAAIGGLTGTIVARGKVQAFIATLV 133

Query: 123 GMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGR---LSAMGLLMLAVVVIGIFL 179
            M  LRGV+ + ++ S PIN         L W   G GR   + A   LM  V +   ++
Sbjct: 134 MMLLLRGVTMVYTDGS-PINTGFSANADLLGWF--GIGRPLGIPAPVWLMALVFIAAWYM 190

Query: 180 AHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALA 239
              TR G  +YA+GGN  +  L GI+     I +Y LS  LA LAG +      +    A
Sbjct: 191 LQHTRLGRYIYALGGNEAATRLSGINVNRVKIIVYSLSGMLAALAGTIEVARLSSAQPTA 250

Query: 240 GVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKI--AI 297
           G G ELDAIA+VV+GGT L+GG G + GTL G  I G +   +N  G +SS++  I  A+
Sbjct: 251 GTGYELDAIAAVVLGGTSLAGGKGRIFGTLIGALILGFLNNGLNLMG-VSSYYQMIVKAV 309

Query: 298 GILLFIFI 305
            ILL + +
Sbjct: 310 VILLAVLV 317