Pairwise Alignments

Query, 418 a.a., putative transporter from Escherichia coli BL21

Subject, 438 a.a., putrescine transporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 92/379 (24%), Positives = 166/379 (43%), Gaps = 28/379 (7%)

Query: 1   MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFA 60
           MS    ++G+ Q   L   +++G+G+  +P   A V G  S+ +W V       +A  FA
Sbjct: 1   MSKSNNKIGVVQLTILTIVNMMGSGIIMLPTQLAQV-GTISILSWLVTAAGSTALAFAFA 59

Query: 61  ILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSW 120
             G     +GG+  +   AFG     +  + +   + +   A    A G+G  +F     
Sbjct: 60  KCGMFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYGAVLFDVELS 119

Query: 121 QLL--LAELGTLALVWYIGTRGASSSANLQTV-IAGLI-----VALIVAIWWAGDI---- 168
            +   LA +G L L       GA  +  + ++ + G+I     V+LI   W+  D+    
Sbjct: 120 PIATCLATIGVLWLATVANFGGARITGQVSSITVWGIILPVIGVSLIGWFWFDFDLYKSA 179

Query: 169 -KPASIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLL 227
             P  +PF          L  ++++  W F+GLE+    +   +NPE++ P A+M G L 
Sbjct: 180 WNPHDLPF-------FEALGGSIAMTLWAFLGLESACANSEAVENPEKNVPIAVMGGTLG 232

Query: 228 AGLVYWGCTVVVLHFDAYGEQMAAAASLPKIVVQLFG--VGALWIACVIGYLACFASLNI 285
           A L+Y   T V+      GE   + A       Q+F   +GA+ +AC I  ++C  SL  
Sbjct: 233 AALIYIVSTNVIAGIVPNGELALSNAPFGLAFAQMFNPTIGAIVMACAI--ISCTGSLLG 290

Query: 286 YIQSFARLVWSQAQHN-PDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEIN--LDA 342
           +  + A++  + A         ++++    P   + A++    V +L+  +  +N   +A
Sbjct: 291 WQFTIAQVFKASADEGFFPKLFSKVTKADAPVLGMLAIVSIQSVLSLMTISPSLNKQFEA 350

Query: 343 LIIYANGIFIMIYLLCMLA 361
           L+  A    I+ Y+L M A
Sbjct: 351 LVNLAVVTNIIPYILSMAA 369