Pairwise Alignments

Query, 311 a.a., D-allose ABC transporter periplasmic binding protein from Escherichia coli BL21

Subject, 319 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

 Score =  137 bits (346), Expect = 3e-37
 Identities = 92/275 (33%), Positives = 146/275 (53%), Gaps = 11/275 (4%)

Query: 28  AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFAS--PSEGDFQSQLQLFEDLSNKNYKG 85
           A+V+K+L+N F++ M+ G +   K      D+ ++    E D  +Q+++ E +   N   
Sbjct: 38  ALVMKSLANEFFLTMEDGAKAYQKEHATEFDLISNGIKDESDTSAQIRIVEQMIASNVNA 97

Query: 86  IAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGA 145
           +  AP  S  LV  + +A   GI +VN+D ++D+D LK     +  FV  DN     KGA
Sbjct: 98  LVIAPADSKALVPVLKKATDAGIKVVNIDNQLDVDVLKSKNLQIP-FVGPDN----RKGA 152

Query: 146 SFIIDKLGAE---GGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIK 202
             + D L  +   G EV IIEG +   + + R  G  +A  +A ++K+V++Q  +W+  K
Sbjct: 153 KLVGDYLAGKLTAGDEVGIIEGVSTTNNAQQRTAGFKDAMDEA-KMKVVSTQSGNWEIDK 211

Query: 203 ALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG 262
              VA+ +L   PN+KA+   ND+MA+G   AV  AGK GKV+VVG D I   + M++ G
Sbjct: 212 GNAVASAMLNEYPNLKALLAGNDSMALGAVSAVRAAGKAGKVMVVGYDNINAIKPMLKDG 271

Query: 263 QMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDK 297
           ++ AT  Q  A     G++  +   K  KV   DK
Sbjct: 272 RVLATADQYAAKQAVFGIEAALKLVKGEKVDTNDK 306