Pairwise Alignments

Query, 311 a.a., D-allose ABC transporter periplasmic binding protein from Escherichia coli BL21

Subject, 291 a.a., ribose ABC transporter substrate-binding protein RbsB from Pantoea sp. MT58

 Score =  159 bits (402), Expect = 7e-44
 Identities = 108/300 (36%), Positives = 167/300 (55%), Gaps = 18/300 (6%)

Query: 12  LVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQ 71
           ++G  LSTSA A    A+V+ TL+NPF+V +K+G + EA  LG ++ +    S+ +   +
Sbjct: 10  ILGATLSTSAMAKDTIALVVSTLNNPFFVSLKEGAQKEADKLGYNLVVL--DSQNNPAKE 67

Query: 72  LQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEA 131
           L   +DL+ +  K +   P  S  +   V  A +  I ++ LD          A G V +
Sbjct: 68  LANVQDLTVRGTKLLLINPTDSDAVGNAVKMANQAKIPVITLDRVA-------AQGTVVS 120

Query: 132 FVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLV 191
            V +DN   G     FI  K+G E  ++  ++G AG ++   R  G  +A   A + +++
Sbjct: 121 HVASDNRFGGKMAGDFIAKKVG-ENAKIIELQGIAGTSAARERGEGFKQA-ADAHKFQIL 178

Query: 192 ASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDG 251
           ASQPAD+DR K L+V  N+LQ +P+++A++  ND MA+G  +A+  AGKTG V+VVG DG
Sbjct: 179 ASQPADFDRTKGLNVMQNLLQAHPDVQAVFAQNDEMALGALRALQTAGKTG-VIVVGFDG 237

Query: 252 IPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ 311
             +  K VEAG+++ATVAQ P  IG      M+  + + KV+  +K      VD  LVTQ
Sbjct: 238 TADGVKAVEAGKLSATVAQMPEKIG------MIGVDTADKVLKGEKVQAVNPVDLKLVTQ 291