Pairwise Alignments

Query, 326 a.a., D-allose ABC transporter permease from Escherichia coli BL21

Subject, 328 a.a., ribose ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  204 bits (518), Expect = 3e-57
 Identities = 107/290 (36%), Positives = 175/290 (60%), Gaps = 2/290 (0%)

Query: 34  IIVAIFGSLSPEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMV 93
           ++V++   L+ + F T +N   +  Q S+  ++ +G  F IL  GIDLSVGA +AL+G +
Sbjct: 37  VVVSLLMGLASDNFFTLSNWFNVLRQVSIVGILAVGMSFVILTGGIDLSVGAAMALAGTI 96

Query: 94  TAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVIS 153
           +A L++    P   A++ GV +   +G +NG LV W  +   I+TL T  + RG+ L+ S
Sbjct: 97  SAGLIVNSGLPAPLALLCGVGLATCIGLLNGALVAWGRMPAIIVTLATMGVARGVGLIYS 156

Query: 154 DANSVYGFSFDFVNFFAASVIG-IPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNS 212
               + G    ++++F    IG +PVPVI  LIV  + W L  R   GR++YA+GGN+ +
Sbjct: 157 GGYPISGLP-GWISWFGVGRIGMVPVPVILMLIVYALAWLLLQRTAFGRHVYAIGGNEMA 215

Query: 213 AFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSF 272
           A  SG+      L V+ ISG  +GLA ++ T RL + +P AG+GFE  AIA+ ++GGT+ 
Sbjct: 216 ARLSGVKTTRIKLAVYAISGFTSGLAAIILTGRLMSGQPNAGVGFELDAIAAVVLGGTAI 275

Query: 273 FGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDR 322
            GG+G +   +IG +++G +NNGLN++ +  Y Q ++ G +I+ A+ + R
Sbjct: 276 AGGRGLVVGTLIGAVLLGILNNGLNLMGINPYLQDIIRGVIILLAIYIAR 325