Pairwise Alignments

Query, 326 a.a., D-allose ABC transporter permease from Escherichia coli BL21

Subject, 339 a.a., D-mannose ABC transporter, permease component (from data) from Herbaspirillum seropedicae SmR1

 Score =  180 bits (457), Expect = 4e-50
 Identities = 105/308 (34%), Positives = 172/308 (55%), Gaps = 14/308 (4%)

Query: 25  KYGTFFILAIIVAIFGSLS-------PEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVA 77
           + G   +L ++  +F  L+          F +  N   I  Q ++ +++  G  F IL A
Sbjct: 26  RLGMLPVLVVLYLLFYGLTLYLSGDGTSNFASAENTMNILRQVAINLVLAAGMTFVILTA 85

Query: 78  GIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFII 137
           GIDLSVG++LA+S ++  ++ L     +   M   +  G  +G +NG +V    ++ F++
Sbjct: 86  GIDLSVGSVLAVSAVLGMQVSLGAAPGWAIPMF--IFSGLVMGMVNGAMVALLNINAFVV 143

Query: 138 TLGTNAIFRGITLVISDANSVYGF---SFDFVNFFAASVIGIPVPVIFSLIVALILWFLT 194
           TLGT   FRG   +++D  +V      SF+++       + +P  +  ++ V L+ W + 
Sbjct: 144 TLGTMTAFRGAAYLLADGTTVLNNDIPSFEWIG--NGDFLHVPWLIWVAVAVVLLSWVIL 201

Query: 195 TRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAG 254
            +  LG +IYA+GGN  +A  +GI V   +L V+ ISG+ +GLAG +S +RL  A    G
Sbjct: 202 RKTVLGMHIYAIGGNLQAARLTGIRVGLVLLFVYSISGLFSGLAGAMSASRLYGANGNWG 261

Query: 255 MGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLI 314
            G+E  AIA+ ++GGTS  GG G I+  V+G LIIG +NNGL IL + +++Q V  G +I
Sbjct: 262 SGYELDAIAAVVLGGTSLMGGVGSIWGTVVGALIIGVMNNGLTILGLSSFWQYVAKGAVI 321

Query: 315 IAAVALDR 322
           + AV LD+
Sbjct: 322 VLAVILDK 329