Pairwise Alignments

Query, 349 a.a., sensory histidine kinase in two-component regulatory system with GlnG from Escherichia coli BL21

Subject, 348 a.a., nitrogen regulation protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  340 bits (873), Expect = 2e-98
 Identities = 178/343 (51%), Positives = 241/343 (70%), Gaps = 3/343 (0%)

Query: 8   DAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIELMQ 67
           D   +LN L+ ++L+ID +L   YAN AA+QLL   S +L    LPE      ++ +L+ 
Sbjct: 2   DKETLLNHLVTAVLVIDKDLKPCYANAAAEQLLGVGSHRLVEQALPEHYQALGVDTQLLS 61

Query: 68  ESLEAGQGFTDNEVTLV-IDGRSHILSVTAQRMPDGMIL--LEMAPMDNQRRLSQEQLQH 124
           ++++AGQ  T N  TLV +D + H + +T   + D  +L  LE+  +D QRR+ Q+  Q 
Sbjct: 62  DAVKAGQSLTVNTATLVTLDAQHHTVDLTLIPLEDEALLSLLELRQVDQQRRIHQQLSQD 121

Query: 125 AQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDR 184
           AQQ AA+ LVR LAHEIKNPLGGLRGAAQLLS+ L DP+  E+T +IIEQADRLR+LVDR
Sbjct: 122 AQQQAAQFLVRNLAHEIKNPLGGLRGAAQLLSRELDDPAQKEFTNLIIEQADRLRSLVDR 181

Query: 185 LLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLN 244
           LLGPQ P      +IH+V ++V  LV + LP N++L RDYDPS+P++  DPDQ++Q +LN
Sbjct: 182 LLGPQRPTQHSLHNIHQVVQKVYKLVEIALPANIQLKRDYDPSIPDIEMDPDQMQQAVLN 241

Query: 245 IVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYPM 304
           I++NA+QAL    GEI++RTRT  Q+T+  +R++L   + + DNGPGIPP L DTLFYPM
Sbjct: 242 ILQNAVQALEHTDGEILIRTRTQHQVTIGSQRHKLVLTLSIIDNGPGIPPELMDTLFYPM 301

Query: 305 VSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPI 347
           V+ RE G+GLGLSIA N+   HSG+I+  S PGHTEF + LPI
Sbjct: 302 VTSREQGSGLGLSIAHNIARLHSGRIDCVSSPGHTEFIISLPI 344