Pairwise Alignments

Query, 349 a.a., sensory histidine kinase in two-component regulatory system with GlnG from Escherichia coli BL21

Subject, 357 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  157 bits (398), Expect = 3e-43
 Identities = 110/341 (32%), Positives = 173/341 (50%), Gaps = 15/341 (4%)

Query: 17  INSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIELMQESLEAGQGF 76
           I +++L  +N  +   NPAA+  +  S R L   P+ + L   +   E      +     
Sbjct: 14  IPALILSGENTILEL-NPAAENFMNGSQRSLLDAPVWDKLMVDAPLEEAFDRVRKNLSPL 72

Query: 77  TDNEVTLVIDGRSHIL-SVTAQRMPDG--MILLEMAPMDNQRRLSQEQLQHAQQVAARDL 133
             N+V +    R  +L ++    + D   ++LL + P +   RL +     +   +A  +
Sbjct: 73  FINDVDVGTGERPPVLCNIQVSPLVDNPELVLLLLEPREIAGRLGRSMQSQSAAKSAIGM 132

Query: 134 VRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRL--LGPQLP 191
              LAHEIKNPL G+ GAAQLL   L +    E T +I+ ++ R+  L++++   G   P
Sbjct: 133 AEMLAHEIKNPLAGITGAAQLLGMNLSNEDR-ELTDLIVAESHRIVKLLEQVEQFGNLRP 191

Query: 192 GTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQ 251
                 +IH V ER      +    +V +  DYDPSLP    D DQ+ QV LN+++NA +
Sbjct: 192 PDLRPVNIHDVLERARRSAVVGFGAHVTIREDYDPSLPNTYADGDQLLQVFLNLLKNAAE 251

Query: 252 ALGPEGGEIILRTRTAFQLTLH-----GERYRLAARIDVEDNGPGIPPHLQDTLFYPMVS 306
           A  P G    +R RT ++L+L      G    +  +I++ D+GPG+PP ++  +F P VS
Sbjct: 252 ACKPGG---TIRIRTFYELSLRLRRKDGSGGTVPLQIEIMDDGPGLPPEIESDVFEPFVS 308

Query: 307 GREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPI 347
           GRE GTGLGL++   +I  H G I   S PG T F + LP+
Sbjct: 309 GRENGTGLGLALVSKIISDHDGWIAVDSVPGRTVFRISLPV 349