Pairwise Alignments

Query, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

Subject, 323 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  252 bits (643), Expect = 1e-71
 Identities = 131/301 (43%), Positives = 200/301 (66%), Gaps = 14/301 (4%)

Query: 22  SLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLA 81
           +LI L++++   S LSP FFT+ NL NILQQ+S+N I+A+GMTL+I++ GIDLSVG   A
Sbjct: 26  TLIGLVIIVITFSFLSPVFFTVPNLLNILQQSSINGIIALGMTLIIISGGIDLSVGPTAA 85

Query: 82  LTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVT 141
           L+  + A+++   V   +A+ A L +GA  G  +G++VA   +Q FI TL  + L R + 
Sbjct: 86  LSAVLGATLMVSGVPVPLAIMATLGVGALCGVFSGMLVAYAGLQPFIVTLGGLSLFRALA 145

Query: 142 MVYTNGSPVNTGFTE-----NADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLG 196
           +++TNG+P+     E     N+ +FG         VP P+ I+  +    W +++ T LG
Sbjct: 146 LIFTNGNPIFGIPVEFRTVINSTIFG---------VPAPIVIVIAIAAILWTVMNKTPLG 196

Query: 197 RYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELD 256
            YI A+GGNE A R++G+ V + K+ V+ + G+LASLA +I + RL +A+PT G  +ELD
Sbjct: 197 EYILAVGGNEEAARVAGVPVKRTKVTVFVISGVLASLASLILIGRLGAAEPTMGNLWELD 256

Query: 257 AIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLV 316
           AIAA  +GG SL GGKG ++GTLIGA+ILG L NGL LL + ++YQ++   ++I++A+L+
Sbjct: 257 AIAAAAIGGASLMGGKGSVIGTLIGAVILGSLRNGLTLLNIQAFYQLLATGLIIIIAMLI 316

Query: 317 D 317
           D
Sbjct: 317 D 317