Pairwise Alignments

Query, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

Subject, 323 a.a., ribose ABC transporter permease from Rahnella sp. WP5

 Score =  543 bits (1399), Expect = e-159
 Identities = 277/320 (86%), Positives = 307/320 (95%), Gaps = 1/320 (0%)

Query: 1   MTTQTVSGR-RYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIM 59
           M++QT+  + R+ +K WL+EQKSLIALLVLIA+VS++SPNFFT+NNLFNILQQTSVNAIM
Sbjct: 1   MSSQTLPAKKRWISKEWLLEQKSLIALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIM 60

Query: 60  AVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIV 119
           AVGMTLVILTSGIDLSVGSLLALTGAVAASIVG+EVNA VAV AALALGAA+G VTG+IV
Sbjct: 61  AVGMTLVILTSGIDLSVGSLLALTGAVAASIVGLEVNAFVAVCAALALGAAVGGVTGMIV 120

Query: 120 AKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIM 179
           AKG+VQAFIATLVMMLLLRG+TMVYTNGSP++TGF + AD+FGWFGIGRPLG+PTPVW+M
Sbjct: 121 AKGKVQAFIATLVMMLLLRGITMVYTNGSPISTGFNDVADVFGWFGIGRPLGIPTPVWLM 180

Query: 180 GIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEV 239
            +VF+AAWYMLHHTRLGRYIYALGGNE+ATRLSGI+V+K+KIIVYSLCGLLA+LA IIEV
Sbjct: 181 AVVFIAAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALASIIEV 240

Query: 240 ARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSS 299
           ARLSSAQP AGTGYELDAIAAVVLGGTSL+GGKGRIVGTLIGALILGFLNNGLNLLGVSS
Sbjct: 241 ARLSSAQPNAGTGYELDAIAAVVLGGTSLSGGKGRIVGTLIGALILGFLNNGLNLLGVSS 300

Query: 300 YYQMIVKAVVILLAVLVDNK 319
           YYQMIVKAVVILLAVLVDNK
Sbjct: 301 YYQMIVKAVVILLAVLVDNK 320