Pairwise Alignments

Query, 240 a.a., putative PAS domain-containing DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 223 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.1 bits (240), Expect = 3e-25
 Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 12/219 (5%)

Query: 22  DQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDL 81
           D+T    ++ Y  +VD L   +G  CE+VLH +++   S + IAN   +GR+ G+P+TDL
Sbjct: 3   DKTTSCTIERYVPLVDFLGAFLGEDCEVVLHDVRNPDNSVLAIANNHISGRRKGAPLTDL 62

Query: 82  ALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLD--VPFS 139
           ALR+L +    +      Y T+++ G  + S T  I + +  + G+LC+NM+    V   
Sbjct: 63  ALRLLKEGAWKERPFVMDYKTQSRDGRPLHSATYFILSDDGELAGMLCLNMDTSSLVEAH 122

Query: 140 QIMSTFVP--------PETPDVGSSV-NFASSVEDLVTQTLEFTIEEVNADRNVSNNAKN 190
            ++  F+         PE PDV  ++  FA S+EDL    +   +             + 
Sbjct: 123 GLLERFIERGRLMPRRPE-PDVPHTLETFAESIEDLTDSIIRQVVNGAAIAPERMTPDEK 181

Query: 191 RQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQ 229
             IV  L EKG+F +K  +  VA  L  S+ T+Y Y+++
Sbjct: 182 MAIVRTLNEKGVFLLKGTVAVVARHLAASEATIYRYLQR 220