Pairwise Alignments

Query, 240 a.a., putative PAS domain-containing DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 213 a.a., DNA-binding protein from Cupriavidus basilensis FW507-4G11

 Score = 63.9 bits (154), Expect = 2e-15
 Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 10/205 (4%)

Query: 28  ILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLH 87
           +L+  + V  GL+      CE+V+H L D K + + I N   +GR++G P T+L L  + 
Sbjct: 15  LLEQLKQVAQGLSETFAPFCEVVVHDLLDPKHAILAIHN-NLSGRQVGDPATELGLARIA 73

Query: 88  DMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVP 147
           D       V   Y  +   G   KS +I I++     +  LC+N++L + F  + +    
Sbjct: 74  D--PEYPQVIANYANQFADGRQAKSTSIGIKDSTGGYVAALCMNVDLTL-FRSLQNVLGQ 130

Query: 148 PETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNV---SNNAKNRQIVL-NLYEKGIF 203
             + D G+++    S++      +   I++  A       S  A++R+ +L  L E G  
Sbjct: 131 FGSVDAGAAMK--ESLDPAGADAIRARIDQFAARLATTPRSLKAEDRRALLRELKEAGFM 188

Query: 204 DIKDAINQVADRLNISKHTVYLYIR 228
           +++ A+  VA  L +S+ TVY Y +
Sbjct: 189 EVRRAMEIVALHLGVSRATVYSYAK 213