Pairwise Alignments

Query, 240 a.a., putative PAS domain-containing DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 214 a.a., Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains from Paraburkholderia bryophila 376MFSha3.1

 Score = 52.4 bits (124), Expect = 7e-12
 Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 13/210 (6%)

Query: 28  ILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLH 87
           +L+ Y  + DG+A L     E+V+H L+D     I       +  ++G P     L  +H
Sbjct: 13  LLERYAPIADGIAALFYPCAEVVIHDLRD---QTIAYLVNNLSKLEVGGPSV---LDEVH 66

Query: 88  DMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMST--- 144
               A       Y      G  M+ ++  + +   +  G+LCIN N+ V F  + ST   
Sbjct: 67  --YAARGRTIGPYEKLNWDGRRMRCVSNILFDDNGKPAGMLCINFNIAV-FEDVRSTLDL 123

Query: 145 FVPP-ETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIF 203
           F+      D  +   F    +D +   L   + E     N       R+IV  L+ +G F
Sbjct: 124 FIRGGNLTDAPAEDLFRDDWQDRINTYLHTWLRERQIGINALTREHKREIVEALHAQGAF 183

Query: 204 DIKDAINQVADRLNISKHTVYLYIRQFKSG 233
             + + N VA  L + + TVY  ++Q K G
Sbjct: 184 RGRSSANYVAAVLTMGRATVYKILKQMKEG 213