Pairwise Alignments

Query, 1034 a.a., multidrug efflux system protein from Escherichia coli BL21

Subject, 1036 a.a., multidrug efflux RND transporter permease subunit from Klebsiella michiganensis M5al

 Score = 1743 bits (4515), Expect = 0.0
 Identities = 885/1032 (85%), Positives = 950/1032 (92%), Gaps = 1/1032 (0%)

Query: 1    MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT 60
            M+ FFI RP+FAWVLAII+M+AG LAI+QLP+AQYPTIAPPAV++SA YPGADAQTVQDT
Sbjct: 1    MSKFFIHRPVFAWVLAIIMMIAGGLAIMQLPIAQYPTIAPPAVAISATYPGADAQTVQDT 60

Query: 61   VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ 120
            VTQVIEQNMNGIDNLMYMSSTSDSAG VTITLTF SGTDPDIAQVQVQNKLQLATPLLPQ
Sbjct: 61   VTQVIEQNMNGIDNLMYMSSTSDSAGGVTITLTFTSGTDPDIAQVQVQNKLQLATPLLPQ 120

Query: 121  EVQQQGISVEKSSSSYLMVAGFVSDNPDITQDDISDYVASNVKDTLSRLNGVGDVQLFGA 180
            EVQQQGISVEKSSSS+LMVAGF+SDN   TQDDISDYVASNVKDT+SRLNGVGDVQLFGA
Sbjct: 121  EVQQQGISVEKSSSSFLMVAGFISDNASTTQDDISDYVASNVKDTISRLNGVGDVQLFGA 180

Query: 181  QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL 240
            QYAMR+WLD +LLNKY LTPVDVINQL++QNDQIAAGQLGGTPAL GQQLNASIIAQTRL
Sbjct: 181  QYAMRVWLDGNLLNKYNLTPVDVINQLQIQNDQIAAGQLGGTPALKGQQLNASIIAQTRL 240

Query: 241  KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL 300
            K+P EFGKVTLRVN+DGSVV LKDVAR+ELGGENYNV+A+INGKPA+GLGIKLATGANAL
Sbjct: 241  KDPAEFGKVTLRVNADGSVVHLKDVARIELGGENYNVVAKINGKPASGLGIKLATGANAL 300

Query: 301  DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ 360
            DTA AIKAKLAELQP+FPQGMKV+YPYDTTPFV++SIHEVVKTLFEAI+LVFLVMYLFLQ
Sbjct: 301  DTAAAIKAKLAELQPYFPQGMKVVYPYDTTPFVKISIHEVVKTLFEAIILVFLVMYLFLQ 360

Query: 361  NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420
            N+RATLIPTIAVPVVLLGTFA+LA FGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
Sbjct: 361  NIRATLIPTIAVPVVLLGTFAVLATFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420

Query: 421  MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL 480
            +E+KLPPKEATEKSM+QIQGALVGIAMVLSAVF+PMAFFGGSTGAIYRQFSITIVSAMAL
Sbjct: 421  VEEKLPPKEATEKSMAQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 480

Query: 481  SVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY 540
            SVLVALILTPALCATLLKP SA+HHE K GFFGWFN  FD SV+HYTNSV  IL  TGRY
Sbjct: 481  SVLVALILTPALCATLLKPASADHHEKK-GFFGWFNAKFDRSVSHYTNSVSGILRCTGRY 539

Query: 541  LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN 600
            L+IY LIV GM VLF+RLP+SFLP+EDQGVF+TMIQLP+GATQERTQKVLD VTDYYL  
Sbjct: 540  LIIYLLIVVGMAVLFVRLPTSFLPDEDQGVFMTMIQLPSGATQERTQKVLDTVTDYYLHK 599

Query: 601  EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDG 660
            EKANVESVFTVNGFSFSGQ QN+GMAFVSLKPWEER+G EN  EA+I RA     +I+D 
Sbjct: 600  EKANVESVFTVNGFSFSGQGQNSGMAFVSLKPWEERSGSENGVEAIIKRATAAFSQIKDA 659

Query: 661  FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL 720
             V PFN+PAI+ELGTATGFDFELIDQ  LGH ALTQARNQLLGM  +HP  LV VRPNGL
Sbjct: 660  MVFPFNLPAIIELGTATGFDFELIDQGNLGHSALTQARNQLLGMVREHPDQLVRVRPNGL 719

Query: 721  EDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRM 780
            EDT QFKL+VDQEKAQALG+SLSDIN+TIS ALGG YVNDFID GRVKKVYVQADAKFRM
Sbjct: 720  EDTPQFKLDVDQEKAQALGISLSDINETISAALGGYYVNDFIDHGRVKKVYVQADAKFRM 779

Query: 781  LPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAM 840
            LP D++ +YVRSANGEMVPFSAF TS WVYGSPRLERYNGLPSME+ GEAAPG S+GDAM
Sbjct: 780  LPSDINNMYVRSANGEMVPFSAFVTSRWVYGSPRLERYNGLPSMEMLGEAAPGKSTGDAM 839

Query: 841  ALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSV 900
             LME LASKLP GIGYDWTGMSYQERLSGNQAPAL AIS +VVFLCLAALYESWSIP SV
Sbjct: 840  ILMEQLASKLPTGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV 899

Query: 901  MLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVV 960
            MLVVPLG+VG LLAA+L    NDVYF VGLLTTIGLSAKNAILIVEFAKDLM+KEGKG++
Sbjct: 900  MLVVPLGVVGALLAASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGII 959

Query: 961  EATLMAVRMHLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFF 1020
            EATL A RM LRPILMTSLAFILGVLPL IS+GAGSGAQNAVG GVMGGM+ ATLLAIFF
Sbjct: 960  EATLEASRMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMLMATLLAIFF 1019

Query: 1021 VPVFFVVIRRCF 1032
            VPVFFVV+RR F
Sbjct: 1020 VPVFFVVVRRRF 1031