Pairwise Alignments

Query, 1034 a.a., multidrug efflux system protein from Escherichia coli BL21

Subject, 1073 a.a., multidrug efflux RND transporter permease subunit from Burkholderia phytofirmans PsJN

 Score = 1337 bits (3461), Expect = 0.0
 Identities = 670/1035 (64%), Positives = 829/1035 (80%), Gaps = 2/1035 (0%)

Query: 1    MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT 60
            MA FFI RPIFAWV+AIILM+AG  ++  LP+AQYPTIAPPAV +SA YPGA A+TV++T
Sbjct: 1    MAKFFIDRPIFAWVIAIILMLAGIASVFTLPIAQYPTIAPPAVQISATYPGASAKTVENT 60

Query: 61   VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ 120
            VTQVIEQ M+G+D+L+Y+SSTSD +G+ TITLTF +GT+PDIAQVQVQNKLQLATPLLPQ
Sbjct: 61   VTQVIEQQMSGLDHLLYLSSTSDDSGTATITLTFAAGTNPDIAQVQVQNKLQLATPLLPQ 120

Query: 121  EVQQQGISVEKSSSSYLMVAGFVSDNPDITQDDISDYVASNVKDTLSRLNGVGDVQLFGA 180
             VQQ G  V KSSSS+L+V  FVS++  + + D+++YVASN++D +SR++GVG V LFG+
Sbjct: 121  AVQQLGTKVTKSSSSFLLVMAFVSEDGSMNKYDLANYVASNIQDPVSRIDGVGTVTLFGS 180

Query: 181  QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL 240
            QYAMRIWLDA+ L  + LTPVDV   L+ QN Q+A G LGGTP++PGQ L A+I   T L
Sbjct: 181  QYAMRIWLDANKLTNFGLTPVDVETALQAQNVQVAGGSLGGTPSVPGQVLQATITEATLL 240

Query: 241  KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL 300
              PE+FG V L+VN DGS VR+KDVAR+ELGGENYN   + NG+P AG GI+LATGANAL
Sbjct: 241  NTPEQFGNVLLKVNQDGSRVRIKDVARIELGGENYNFDTKYNGQPTAGFGIQLATGANAL 300

Query: 301  DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ 360
             TAKA++AK+AEL  +FP G+ V YPYDTTPFV+LSI EVVKTL E I+LVFLVMYLFLQ
Sbjct: 301  ATAKAVRAKVAELSKYFPHGLVVQYPYDTTPFVRLSIEEVVKTLLEGIVLVFLVMYLFLQ 360

Query: 361  NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420
            N+RATLIPTIAVPVVLLGTFAI+   G+SINTL+MFG+VLAIGLLVDDAIVVVENVERVM
Sbjct: 361  NLRATLIPTIAVPVVLLGTFAIMGLVGFSINTLSMFGLVLAIGLLVDDAIVVVENVERVM 420

Query: 421  MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL 480
             E+ L P++AT K+M QI GALVG+A+VLSAVF+P+AF GGS GAIYRQFS+TIV+AM L
Sbjct: 421  QEEGLSPRDATRKAMDQITGALVGVALVLSAVFVPVAFSGGSVGAIYRQFSLTIVAAMVL 480

Query: 481  SVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY 540
            SVLVALILTPALCAT+LKP+   H E   GFFGWFN TF+ S + Y + V  ++  +GR+
Sbjct: 481  SVLVALILTPALCATILKPIEQGHQEKTTGFFGWFNRTFNKSRDKYHSGVHHVIKRSGRW 540

Query: 541  LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN 600
            L+IY +++  + +LF++LP SFLP+EDQG    ++Q P+G+TQE T + L  V+DY L  
Sbjct: 541  LIIYMVVIFAVGLLFVKLPKSFLPDEDQGTMFVLVQTPSGSTQETTARALKDVSDYLLNT 600

Query: 601  EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDG 660
            EK+ VES FTVNGFSF+G+ QNAG+ FV +K + +R   +   +A++ R  M  G  ++ 
Sbjct: 601  EKSIVESTFTVNGFSFAGRGQNAGLVFVRMKDYAQRQHSDQKVQALVGRLFMHFGSYKNA 660

Query: 661  FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL 720
             V P N P+I ELGTA GFDFEL D+AG+GH+ L +ARN LLGMAA+ P +L  VRPNGL
Sbjct: 661  LVYPVNPPSIPELGTAAGFDFELQDRAGVGHEKLMEARNMLLGMAAKDP-TLAQVRPNGL 719

Query: 721  EDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDR-GRVKKVYVQADAKFR 779
             DT QFK+++D EKA ALGVSLS I+QT S A    YVN+F+D  GR+KKVY+Q DA FR
Sbjct: 720  NDTPQFKVDIDHEKASALGVSLSAIDQTFSIAWASQYVNNFLDTDGRIKKVYLQGDAPFR 779

Query: 780  MLPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDA 839
            M PED++  YVR++ G MVPFS+F +  W YGSP+LERYNG+ ++EIQG AAPG S+G A
Sbjct: 780  MTPEDLNAWYVRNSAGGMVPFSSFASGTWTYGSPKLERYNGISAVEIQGAAAPGKSTGQA 839

Query: 840  MALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVS 899
            M  ME L +KLPAG+GY+WTG+S QER SG+QAP L  IS +VVFLCLAALYESWSIP S
Sbjct: 840  MTAMEALVAKLPAGVGYEWTGLSLQERQSGSQAPILYGISILVVFLCLAALYESWSIPFS 899

Query: 900  VMLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGV 959
            V++VVPLG++G LLAATL   +NDV+F VGLLTT+GLSAKNAILIVEFA++L + EG G 
Sbjct: 900  VIMVVPLGVIGALLAATLRGLENDVFFQVGLLTTVGLSAKNAILIVEFARELQQGEGMGP 959

Query: 960  VEATLMAVRMHLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIF 1019
            +EA L A R+ LRPILMTSLAFILGV+PLAISNGAGS +Q+A+G GV+GGM++AT LAIF
Sbjct: 960  IEAALEAARLRLRPILMTSLAFILGVMPLAISNGAGSASQHAIGTGVIGGMLTATFLAIF 1019

Query: 1020 FVPVFFVVIRRCFKG 1034
             +P+FFVVIR  F G
Sbjct: 1020 MIPMFFVVIRAKFGG 1034