Pairwise Alignments

Query, 1517 a.a., glutamate synthase, large subunit from Escherichia coli BL21

Subject, 1536 a.a., glutamate synthase (ferredoxin) from Synechococcus elongatus PCC 7942

 Score = 1239 bits (3205), Expect = 0.0
 Identities = 689/1511 (45%), Positives = 941/1511 (62%), Gaps = 70/1511 (4%)

Query: 39   ERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFFR 98
            ERD CG G +A  +G  SH +V  ++ AL  M+HRG   AD  +GDG GL+   P    +
Sbjct: 23   ERDACGVGFVADQQGRASHDLVEKSLRALGCMEHRGGCSADSDSGDGAGLMTAIPTDLLK 82

Query: 99   IVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVPTNEGVLG 158
                        +  +GM+FL +    A  AR+++E+ +  E L  +GWR VPT   VLG
Sbjct: 83   TWLGAAAPADLSSVGLGMVFLPQHGAEATIARQLIEQIVAEENLQFLGWRLVPTRPEVLG 142

Query: 159  EIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLE-----ADKDFYVCSLSNL 213
            + A ++LPRIEQ F+ A    R  + ER+L++ R+R+E  ++     A +DFY+CSLS+ 
Sbjct: 143  QQARANLPRIEQCFI-ASEQLRDDEFERQLYLVRKRVETAVKKALGTASEDFYICSLSSR 201

Query: 214  VNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGEIN 273
              +YKG+     L +FY DL +    S   ++H+RFSTNT+P+WPLAQP R+L HNGEIN
Sbjct: 202  TVVYKGMVRSEVLGQFYTDLTNPAYTSNFGVYHRRFSTNTMPKWPLAQPMRFLGHNGEIN 261

Query: 274  TITGNRQWARARTYKFQTPLIPD-LHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRAM 332
            T+ GN  W  AR    Q P   D + D  P V+   SDS+++DN LELL+  G     A+
Sbjct: 262  TLLGNINWMMARQADLQHPAWGDRIGDLLPVVDLNRSDSANLDNALELLVNSGRTPQEAL 321

Query: 333  RLLVPPAWQNNPDM--DPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPA 390
             ++VP A+QN P +   PE+  F++F S   EPWDGPA +V SDG+     LDRNGLRPA
Sbjct: 322  MVMVPEAYQNQPALADHPEIVDFYEFYSGLQEPWDGPALLVFSDGKKVGACLDRNGLRPA 381

Query: 391  RYVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSR 450
            RY IT D  I  ASE G+ D   + ++EKGR+GPG+++ +D  +  ++ + +    + S+
Sbjct: 382  RYSITADGYIVFASEAGVVDLPVETIIEKGRLGPGQMIEVDLETKEVIKNWDIKKRIASQ 441

Query: 451  HPYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENG 510
             PY +W+++  R+++  +D  +E+    +L D  L   Q  F Y+AE++D VI  +  +G
Sbjct: 442  QPYGQWLQE--RQVLENKDFGNEQ----QLGDFDLLRLQTGFGYTAEDVDMVIEAMASDG 495

Query: 511  QEAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNV 570
            +E    MGDD P AVLSS+ R++YDYF+Q+FAQVTNP IDPLRE+ VMSL+ ++G   N+
Sbjct: 496  KEPTFCMGDDIPLAVLSSKARLLYDYFKQRFAQVTNPAIDPLRESLVMSLSMTLGARDNL 555

Query: 571  FCEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTT--LEATVKELC 628
                   A  L   SP+L  ++ +Q+   K+   +A  L   + + +    L+A +  LC
Sbjct: 556  LQVGPESARLLKLDSPVLNEAELEQV---KQSTLKAAELSTLYAIEQGPDGLQAAIAALC 612

Query: 629  DKAEKMVRSGTVLLVLSDRN---IAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETA 685
             +AE+ V++G  +L+LSDR    +A     +P  +AVGA+   L+ Q LR  A+++V+TA
Sbjct: 613  QQAEQAVQAGHQILILSDRTGAGLAPQISYIPPLLAVGAVHHHLIRQGLRMKASLVVDTA 672

Query: 686  SARDPHHFAVLLGFGATAIYPYLAYETLGR---------LVDTHAIAK-DYRTVMLNYRN 735
                 HHFA L+G+GA+A+ P+LA ET+           L++   IA+        N+R 
Sbjct: 673  QCWSTHHFACLIGYGASAVCPWLALETVRHWWHAPKTQSLMERGKIAQVSLAGAQQNFRK 732

Query: 736  GINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDL 795
             +  GL KI+SKMGIS + SY  +++FEA+GL  +VV L F+G  SR+GG +  D   ++
Sbjct: 733  AVEAGLLKILSKMGISLLPSYHGAQIFEAIGLSMEVVDLAFRGTTSRLGGLTLADIAHEV 792

Query: 796  LNLSKRAW--LARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQSGE-YSDYQEYAKL 852
            ++   RA+  L +K +   G ++Y  GGEYH  +P++ + L +AV +G+ Y  ++ Y K 
Sbjct: 793  MSFHTRAFPELNQKKLENFGFVQYRPGGEYHMNSPEMSKALHKAVAAGKNYDHFEVYRKY 852

Query: 853  VNERPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMN 912
            + ERP T LRDLL       A+++ +VE    + +RF T  MS+GALS EAHE LA AMN
Sbjct: 853  LEERPVTALRDLLQFVSDRPAISLDEVESVEAIVQRFCTGGMSLGALSREAHETLAIAMN 912

Query: 913  SIGGNSNSGEGGEDPARY-----------------------GTNKVSRIKQVASGRFGVT 949
             +GG SNSGEGGEDP RY                       G    S IKQ+ASGRFGVT
Sbjct: 913  RLGGKSNSGEGGEDPVRYKVLGDVDAEGNSPTLPHLHGLRNGDTASSAIKQIASGRFGVT 972

Query: 950  PAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIE 1009
            P YL++AD ++IKV+QGAKPGEGGQLPG KV+PYIA LR S  GV+LISPPPHHDIYSIE
Sbjct: 973  PEYLMSADQLEIKVSQGAKPGEGGQLPGKKVSPYIAFLRNSKAGVSLISPPPHHDIYSIE 1032

Query: 1010 DLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSV 1069
            DLAQLIFDL Q+NPKA +SVKLV+E G+GT+A GVAKA AD+I ++G+DGGTGASPLSS+
Sbjct: 1033 DLAQLIFDLHQINPKAQVSVKLVAEIGIGTVAAGVAKANADIIQVSGHDGGTGASPLSSI 1092

Query: 1070 KYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMV 1129
            K+AG PWELGL E  + L+ N LR ++ L+VDGGLKTG D++ AA++GAE FGFG+  M+
Sbjct: 1093 KHAGGPWELGLTEVHRVLMENQLRQRVLLRVDGGLKTGWDVVMAALMGAEEFGFGSIAMI 1152

Query: 1130 ALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTR 1189
            A GC   R+CH NNC  GVATQ ++LRK  + G+P  V N+F  IA E R ++A+LG   
Sbjct: 1153 AEGCIMARVCHTNNCPVGVATQQEQLRK-RFTGIPEHVVNFFILIAEEVRSILAKLGYRS 1211

Query: 1190 LVDLIGRTDLL-KELDGFTAKQQKLALSKLLETAEPHPGKALY----CTENNPPFDNGLL 1244
            L +L GRTDLL    D    K   L L  L++  +    ++        +N P  D+ LL
Sbjct: 1212 LTELTGRTDLLAPRPDLKLTKTAALNLDCLIKLPDTRSDRSWLVHDEVHDNGPVLDDQLL 1271

Query: 1245 NAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGT 1304
                L  A   +  + S      I NTDRSVGA L+G IAQ +G+ G     I   FNG+
Sbjct: 1272 ANPALTAA---IANQDSVAIEQAIVNTDRSVGARLAGAIAQRYGNYGFEGQ-ISLNFNGS 1327

Query: 1305 AGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGA 1364
            AGQSFG +N  GV L L G+ANDYVGKGM GG I +RP  G  F   ++SI+GNTCLYGA
Sbjct: 1328 AGQSFGAFNISGVSLNLVGEANDYVGKGMNGGEIIVRPEAGVRFDPSQSSIVGNTCLYGA 1387

Query: 1365 TGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGF 1424
            TGG L+A GRAGERFGVRNS A  VVEG GD+ CEYMTGG + +LG  G N GAGMTGG 
Sbjct: 1388 TGGSLFANGRAGERFGVRNSKAQAVVEGTGDHCCEYMTGGTIVVLGPCGRNVGAGMTGGL 1447

Query: 1425 AYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTF 1484
            AY LDE G F  +VNPE+V++  V   A  E+ L+ LIT H + TGS +   IL  W  +
Sbjct: 1448 AYFLDEDGQFPAKVNPEIVKLQRVSTSA-GEQQLKQLITAHAEKTGSPKACHILEQWEQY 1506

Query: 1485 ATKFALVKPKS 1495
              +F  V P S
Sbjct: 1507 LPQFWQVVPPS 1517