Pairwise Alignments

Query, 244 a.a., membrane spanning protein in TonB-ExbB-ExbD complex from Escherichia coli BL21

Subject, 331 a.a., biopolymer transporter ExbB from Pseudomonas fluorescens FW300-N2E3

 Score =  268 bits (685), Expect = 1e-76
 Identities = 144/220 (65%), Positives = 170/220 (77%), Gaps = 2/220 (0%)

Query: 6   MQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEA 65
           M  DLS WGMYQ+ADI+VK VMIGL +AS++TW I+ +K +E    KRRL+ E   L +A
Sbjct: 97  MAHDLSPWGMYQNADIIVKIVMIGLAIASIITWTIWIAKGLELLGAKRRLRGEITSLKKA 156

Query: 66  RSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQ 125
            +L  A+  AA  G+  L+  L+++A  E+ LS  S + EGIKER SFRLER VAA GR 
Sbjct: 157 TTLKDASASAAKEGT--LANLLVHDALEEMRLSANSREKEGIKERVSFRLERLVAACGRN 214

Query: 126 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 185
           M  G G LATIG+ +PFVGLFGTVWGIMNSFIGIA+TQTTNLAVVAPGIAEALLATA+GL
Sbjct: 215 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 274

Query: 186 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLD 225
           VAAIPAVVIYNVFAR I G+KA + D +AQVLLL SRDLD
Sbjct: 275 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLD 314