Pairwise Alignments

Query, 244 a.a., membrane spanning protein in TonB-ExbB-ExbD complex from Escherichia coli BL21

Subject, 229 a.a., Tol-Pal system protein TolQ from Rahnella sp. WP5

 Score =  110 bits (275), Expect = 2e-29
 Identities = 72/205 (35%), Positives = 106/205 (51%), Gaps = 29/205 (14%)

Query: 8   TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKS---------VEFFNQK------ 52
           TD+++  ++  A I+VK +M+ L+  S+ +WAI   ++          E F  K      
Sbjct: 2   TDMNILDLFLKASILVKLIMLVLVCFSIASWAIIIQRTKVLNAATREAEAFEDKFWSGIE 61

Query: 53  -RRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERT 111
             RL +E Q      +L+ A  I      +   LH  N    E  +       EG     
Sbjct: 62  LSRLYQESQ--GRRETLSGAEQIFHSGFKEFARLHRANSHAPEAVI-------EGSSRAM 112

Query: 112 SFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVA 171
                R + ++   +     +L T+G+ISP++GLFGTVWGIM++FIG+   +   L +VA
Sbjct: 113 RISFNRELESLETHIP----FLGTVGSISPYIGLFGTVWGIMHAFIGLGSVKQATLQMVA 168

Query: 172 PGIAEALLATAIGLVAAIPAVVIYN 196
           PGIAEAL+ATAIGL AAIPAV+ YN
Sbjct: 169 PGIAEALIATAIGLFAAIPAVMAYN 193