Pairwise Alignments

Query, 219 a.a., hemolysin III family HylIII inner membrane protein from Escherichia coli BL21

Subject, 217 a.a., channel protein, hemolysin III family subfamily (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  237 bits (605), Expect = 1e-67
 Identities = 118/214 (55%), Positives = 154/214 (71%), Gaps = 1/214 (0%)

Query: 3   QKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGSMI 62
           +KPL    YSL+EEIANS+SHG+G++ G VGL+ +L++ VD + S+  +T   +YG S+I
Sbjct: 4   EKPLNISAYSLSEEIANSISHGLGVIAGAVGLIFMLLKGVD-HLSSIQLTGVIIYGASLI 62

Query: 63  LLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIWSL 122
           LLFL+STLYH++ H+  K  LK  DHCAIY LIAGTYTP +L+ L   L+  ++  IWSL
Sbjct: 63  LLFLSSTLYHSVTHRGWKHKLKIVDHCAIYCLIAGTYTPLMLISLQGNLSTIILTAIWSL 122

Query: 123 ALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSLGV 182
           A+ GILFK    HRFK LSLV YLAMGWL + VI ++   ++     LL +GG+ Y+LGV
Sbjct: 123 AIGGILFKTLFIHRFKKLSLVLYLAMGWLCMTVIGDLTAAMSPLGFNLLLLGGLFYTLGV 182

Query: 183 IFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYI 216
           IFYV KRIPYNHAIWH FVL G++ HF  IYL +
Sbjct: 183 IFYVGKRIPYNHAIWHLFVLAGAMSHFFCIYLTV 216