Pairwise Alignments

Query, 918 a.a., hybrid sensory histidine kinase, in two-component regulatory system with UvrY from Escherichia coli BL21

Subject, 935 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella oneidensis MR-1

 Score =  724 bits (1868), Expect = 0.0
 Identities = 417/929 (44%), Positives = 596/929 (64%), Gaps = 28/929 (3%)

Query: 1   MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGM 60
           MT YSLR+ +++L LAPT+L+G+LL  +F ++R+ +L+  L + G++IIEPLA+++E G+
Sbjct: 7   MTKYSLRSWVLVLALAPTILVGILLGSYFTINRFYELEDTLIEQGSNIIEPLAIASEVGL 66

Query: 61  SLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQL 120
              +RE+  +L++      S +V++I+++D +N+LFVTS++H D   M+    +   ++ 
Sbjct: 67  VGNDREATKRLLAAAQLNKSTLVKSIAIFDIHNQLFVTSHYHKDFEIMRYKEALTNLQKT 126

Query: 121 TVTRDGDIMILRTPIISESYSPDESPSSDAKNSQN--MLGYIALELDLKSVRLQQYKEIF 178
            +   GD +ILRTPI + +      P++    + N  +LGYI++ ++ +   L+Q++   
Sbjct: 127 EIEHVGDSLILRTPIFATATPTGSEPANVDIQTDNGELLGYISVIINKERALLEQHRAAV 186

Query: 179 ISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKN 238
            + +++L  + + L+F +RL+++VT PI  MV  V +IR G+LD+R++G ++GELD+LK 
Sbjct: 187 AAFIIVLIGVQLNLLFTFRLVKNVTQPITEMVRVVAKIREGKLDARLQGNLIGELDLLKR 246

Query: 239 GINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLA 298
           GIN+MA SL+ YH+EMQ NIDQATSDLRETLEQ+EIQNVELDLAKKRA EA+RIKSEFLA
Sbjct: 247 GINAMAGSLSEYHDEMQQNIDQATSDLRETLEQIEIQNVELDLAKKRALEASRIKSEFLA 306

Query: 299 NMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGK 358
           NMSHELRTPLNGVIGF R  +KT L  +Q D++NTIERSA NLLAIIND+LDFSKLEAGK
Sbjct: 307 NMSHELRTPLNGVIGFARQLVKTPLHSSQVDYINTIERSATNLLAIINDILDFSKLEAGK 366

Query: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVG 418
           ++LES+PF LR TL E +TL++ S+  KGLEL ++I  +VPDNV GD +R+ QII NLVG
Sbjct: 367 MVLESMPFGLRETLGETITLISGSAQAKGLELVVDIAPNVPDNVNGDSMRVCQIINNLVG 426

Query: 419 NAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRR 478
           NAIKFT++G++ + +E +A ++ +V +   + DTGIGI E  Q  LFQAF QAD+SISRR
Sbjct: 427 NAIKFTDSGSVLVKLELQAQTDEQVVLRCDVIDTGIGIDESQQDFLFQAFGQADSSISRR 486

Query: 479 HGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKR 538
            GGTGLGLVIT++LVN+MGG I F S  ++GS FWF + L L    I +    + L  K 
Sbjct: 487 FGGTGLGLVITKRLVNQMGGQIGFTSSVDKGSNFWFTLPLGLGQFQIGDSLPLEKLQNKT 546

Query: 539 LAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPA------HYDMMLLGIAVTFREPL 592
           + + EP           L +   +V +     +L          +D +LL     F  P 
Sbjct: 547 VLFYEPRVLTHSVISRQLKQWDTKVTHHQHIPSLQTTLSTTEHQFDYVLLS-CHGFNNPN 605

Query: 593 TMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHH 652
            +    L +A + TD L++   C  Q    +  +      L  P++  +L  A       
Sbjct: 606 HLV-STLIQAKAKTDCLIVLFDCQEQDMLSQFIRPNADVVLSLPVSEHQL--ARNMLYPP 662

Query: 653 KQNTLLP----ATDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAK 708
            +  LLP    A   ++ ++TV+AVDDN ANLKLI  LL ++V  V   +SG +AV++AK
Sbjct: 663 MEYDLLPPVSIAVPAARQSLTVLAVDDNFANLKLIDTLLNELVTTVIAVNSGEEAVKQAK 722

Query: 709 QMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYL 768
              FDLI MDIQMP  DGI A + I Q    + TP+IAVTAHA+A ++E +LG+GM  YL
Sbjct: 723 TRTFDLIFMDIQMPGTDGISATKQIRQGSMNRNTPIIAVTAHAIAEERELILGSGMDGYL 782

Query: 769 AKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARD 828
            KPI+E  L   + R+         +  P+     ++   TL+W L L QA  K+ LA D
Sbjct: 783 PKPIDEAALKAEINRW---------ITRPKFTHFDLH---TLNWDLCLTQANHKSGLALD 830

Query: 829 MLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRS 888
           ML+MLLD LP+  + +E  L   +   ++  IHKLHG+  Y GVP  + LCQ IE  L+ 
Sbjct: 831 MLRMLLDSLPQTVSAIEAALSQNDQVTMLSTIHKLHGASCYCGVPTTQRLCQEIESALKR 890

Query: 889 GTKEEDLEPELLELLDEMDNVAREASKIL 917
             + EDLEPE+LELLDE+  V   A ++L
Sbjct: 891 EARVEDLEPEILELLDELTKVESAAKQVL 919