Pairwise Alignments

Query, 526 a.a., hydrogenase 4, membrane subunit from Escherichia coli BL21

Subject, 643 a.a., NADH-plastoquinone oxidoreductase, chain 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (375), Expect = 4e-40
 Identities = 109/352 (30%), Positives = 179/352 (50%), Gaps = 22/352 (6%)

Query: 70  LHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLV 129
           L ID L  + L ++  I F+  IYS+GYM H+ +        +  +  +  LF F ML++
Sbjct: 77  LKIDTLSAVMLMVVTTISFMVHIYSVGYMHHDAS--------VPRFMAYLSLFTFFMLML 128

Query: 130 VTSNNLIVMWAAIEATTLSSAFLVGI-YGQRSSLEAAWKYIIICTV---GVAFGLFGTVL 185
           VT++NL+ M+   E   L+S  L+G  Y + S+  AA K  ++  V   G   G+FG   
Sbjct: 129 VTADNLVQMFFGWEGVGLASYLLIGFWYEKPSANAAAIKAFVVNRVGDFGFTLGIFGVFF 188

Query: 186 VYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDA 245
           V+         A  A   ++V+     ++   M +  + L IG   K+    +H WLPDA
Sbjct: 189 VFGTVGLDAIFAGAAQHANDVVTFFG-IEWHAMTILCLLLFIGAMGKSAQLGLHTWLPDA 247

Query: 246 HSEAPSPVSALL-SAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFI 304
             E P+PVSAL+ +A ++   + ++ R   +    + SD    ++ I G  +   AA   
Sbjct: 248 -MEGPTPVSALIHAATMVTAGVFMVARMSPLF---VLSDTAMTVVTIVGASTAIFAATVG 303

Query: 305 LVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVL-L 363
            VQ DIKR++AYS+   +G +   LG+G      A + H++ H+  K LLF G+G+V+  
Sbjct: 304 CVQNDIKRVIAYSTCSQLGYMFFALGVG---AFGAGIFHLMTHAFFKALLFLGAGSVIHA 360

Query: 364 KYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLA 415
               +D+  + G+ +++P T  L   G+LAL G+PPF  F S+ M +    A
Sbjct: 361 MSDEQDMRRMGGIWRMVPLTYALMWIGSLALMGVPPFAGFFSKDMILEVAYA 412