Pairwise Alignments

Query, 565 a.a., sensor kinase regulating yhjX; pyruvate-responsive YpdAB two-component system from Escherichia coli BL21

Subject, 569 a.a., signal transduction histidine kinase, LytS (RefSeq) from Shewanella amazonensis SB2B

 Score =  226 bits (577), Expect = 1e-63
 Identities = 159/572 (27%), Positives = 295/572 (51%), Gaps = 34/572 (5%)

Query: 6   NMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVP 65
           +++L +  +  L L+ ++   +  LF+ L   +   P +++ +  IFS F + +T+ G  
Sbjct: 2   SLILLLTQQMCLYLVFVYLASKTPLFKVLTENAPRLPHKVI-IYVIFSAFCIMATYFGEQ 60

Query: 66  VEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCIS 125
             G++ N R +  + GG+L GP  G   G+  G+HRY   +GG T + C +++ L G  +
Sbjct: 61  THGAIANTRAMGAVLGGLLGGPVTGFFVGLTGGLHRY--SMGGFTDVACALSTTLEGLSA 118

Query: 126 GWINLKIPKAQRWRV---GILGGML---CETLTMILVIVWAPTTALGIDIVSKIGIPMIL 179
           G I+L + +A +  +    ++ G +    E + M+++++ A        +V +I  PM+L
Sbjct: 119 GLISLTLRRAGKTELIFHPLVAGFVTFYAEVMQMLIILLVAKPYDEAWALVRQIAPPMLL 178

Query: 180 -GSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEIIRD 237
             S+     + +++  +   +  ++  +  AL IA +++ L     N ++  +V  I+ +
Sbjct: 179 VNSMGSALFMSMLKDQKAMFDKLSSTFSTKALKIAERSVGLLSQGFNEKTSAQVARIVIE 238

Query: 238 DIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEI 297
           + +  AVAIT+ + +LA++G+G  ++  G    S  T +A+   K++  +  E      I
Sbjct: 239 ETNVGAVAITDREKLLAFIGIGADHHIPGTPIASAITLEAIRDNKVMFADGMEVPYACSI 298

Query: 298 HSM------LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQ 351
            S       LVIPL     V GT+K+Y        +  + +  G+++++S Q+   R EQ
Sbjct: 299 SSQCRLGSSLVIPLRSDTEVIGTIKLYEPKNKLFLNINRTLGEGIAKLLSNQILYGRVEQ 358

Query: 352 LREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDD 411
            + +  + EL+ LQ+++NPHFLFNALN I + IR +PD AR L+  LS++LR N++ +  
Sbjct: 359 QKNLLTQTELKLLQAQVNPHFLFNALNTIGAIIRRDPDMARGLLQKLSQFLRINLK-RSP 417

Query: 412 EQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEE-VNCCIPSLLIQPLVENAIVHGIQ 470
           E + +  EL  I  Y+ IE+ARF D+L+V   I  E ++  +P+  +QP++ENA+ HG  
Sbjct: 418 EMVTLADELEHIDAYLGIEKARFIDRLSVNIAIPPELMHQKLPAFTLQPIIENAVKHGTS 477

Query: 471 PCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK-IGLLNVHHRVKL 529
                GV+ +S  +    + + V D      P           P N+ +G+  VH R++ 
Sbjct: 478 QLLSPGVIDVSGRQQEQMLVLEVADNAGLYRP----------TPNNEGLGMNLVHKRIQN 527

Query: 530 LYGEGLHIR-RLEPG--TEIAFYIP-NQRTPV 557
            +GE   +    EP   T +   +P N  TP+
Sbjct: 528 QFGEQYGVTVECEPDTLTRVRICLPINVDTPI 559