Pairwise Alignments

Query, 311 a.a., dsd operon activator; autorepressor from Escherichia coli BL21

Subject, 311 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  263 bits (671), Expect = 5e-75
 Identities = 142/300 (47%), Positives = 187/300 (62%), Gaps = 6/300 (2%)

Query: 12  LNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVEL 71
           LNG  LS +HTF VAARH SFA AAEEL L+ SAVSHRI +LEEEL ++LF R  RKVEL
Sbjct: 12  LNGAHLSNLHTFLVAARHLSFARAAEELCLTASAVSHRIARLEEELSLKLFHRLPRKVEL 71

Query: 72  THEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPS 131
           T +G+R++  ++ ++D L++ + +  + ++ G L  Y+RPS+AQCWLVP L DFT RYP 
Sbjct: 72  TDDGERIFKVMQQTMDKLSEAVQERSHAQIEGQLCFYARPSVAQCWLVPRLSDFTTRYPG 131

Query: 132 ISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNT 191
           I L V  GN+ ++ +   IDL + + +     L    LM E I PVCSP+YA+ H L   
Sbjct: 132 IQLDVRVGNEPIDYRTRRIDLVLCYSNGEHPGLESVRLMPERIAPVCSPQYAEAHGLVGH 191

Query: 192 VINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPT---SSGIGFDRSDLAVIAAMNH 248
              L  CT LHD  AW N S   EW  W    AV  PT   S  + FDRSDL+ +AA+NH
Sbjct: 192 PERLSQCTALHDVAAWDNISFDAEWRLWLD--AVGEPTELPSRFMTFDRSDLSTLAAINH 249

Query: 249 IGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWP-KIEAFITWLREQV 307
            GVA+GR++LV+KR+  GELV PFG      +  YY+        P +++  I WL EQV
Sbjct: 250 AGVAIGREQLVRKRIQDGELVLPFGGFREAVNYGYYLVHPAHETMPRRLQVLIDWLIEQV 309