Pairwise Alignments

Query, 311 a.a., dsd operon activator; autorepressor from Escherichia coli BL21

Subject, 316 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  140 bits (354), Expect = 3e-38
 Identities = 92/293 (31%), Positives = 142/293 (48%), Gaps = 3/293 (1%)

Query: 12  LNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVEL 71
           L    L     FE AARH+SF  AA EL  +  AVS ++ +LEE+LG +LF R +R +EL
Sbjct: 5   LGDLSLDLFRAFEAAARHRSFTAAAVELGTTQPAVSQQLKRLEEQLGTRLFDRIYRGIEL 64

Query: 72  THEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPS 131
           T  G  ++  ++  L +++  +  I  Q     L + +  + A  WL+P L  F    P 
Sbjct: 65  TEAGAILFEQVQVGLQSIDAGLNAISAQHQHEVLQVATDFAFAAYWLMPRLHRFHEANPQ 124

Query: 132 ISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNT 191
           + ++++T   + N+ R  ID+A+ F D    Q   H+L  EE+ PVCSP   +  A+   
Sbjct: 125 VDVSLVTSERSHNMLRTDIDVAVLFGDGRFKQGESHWLFSEEVFPVCSPLLLKDRAVPLP 184

Query: 192 VINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSG-IGFDRSDLAVIAAMNHIG 250
              L    LLH R    N S   +W    +   +  P + G + FD   L + AA+   G
Sbjct: 185 AHALQELPLLHLR--GENSSHWFDWSGVFRTLGIATPPAPGQLRFDNYTLLIQAAIGGQG 242

Query: 251 VAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFITWL 303
           VA+G + LV   LA G L  P  +  +    +Y +     R+   I+ F+ WL
Sbjct: 243 VAIGWRHLVDNLLAQGLLCRPIAETAISSFGYYVVLPQRKRRSALIQQFVDWL 295