Pairwise Alignments

Query, 310 a.a., putative inner membrane protein from Escherichia coli BL21

Subject, 305 a.a., formate/nitrite transporter family protein from Rahnella sp. WP5

 Score =  397 bits (1020), Expect = e-115
 Identities = 195/302 (64%), Positives = 237/302 (78%), Gaps = 2/302 (0%)

Query: 8   QHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAG 67
           QH ++ +V+S+E  +GK+IE  E+ LPS+A A+HE IR +GEKELERD  ALLWSAIAAG
Sbjct: 6   QHHNDKDVDSDEHTQGKEIETGEENLPSKAAAVHEVIRMEGEKELERDGQALLWSAIAAG 65

Query: 68  LSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQK 127
           LS+ ASL+AKGI H  L   P  F +EN+GYT GFIIVIMARQQLFTENTVTAVLP+MQK
Sbjct: 66  LSISASLMAKGILHARLPDTPERFFIENIGYTVGFIIVIMARQQLFTENTVTAVLPIMQK 125

Query: 128 PTMSNVGLLIRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEM 187
           PT  N+ LL+RLWG+VL GN++G G+AA  F  +P F+  T +AF  I MD+MK  P  M
Sbjct: 126 PTGRNILLLLRLWGIVLAGNVIGGGLAALVFHLVPFFDTATDEAFRTISMDIMKKDPEGM 185

Query: 188 FANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTL 247
           F   ++SGWLIATMVWM P+AG AK+ VI+LMT+++A+GD THIVVGSVE+LYLVF+G +
Sbjct: 186 FVGGMVSGWLIATMVWMIPSAGTAKLWVIMLMTYMVAIGDLTHIVVGSVEVLYLVFSGAI 245

Query: 248 HWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAENIKKNYK 307
            W +FIWPFALPTLAGNI GGTFIFAL+SHAQIRNDMSN++KAEA  K E  E  KK   
Sbjct: 246 PWYEFIWPFALPTLAGNIFGGTFIFALISHAQIRNDMSNQKKAEA--KKEEQEAAKKEAA 303

Query: 308 NP 309
            P
Sbjct: 304 KP 305