Pairwise Alignments

Query, 310 a.a., putative inner membrane protein from Escherichia coli BL21

Subject, 279 a.a., inner membrane protein YfdC from Phaeobacter inhibens DSM 17395

 Score =  206 bits (524), Expect = 5e-58
 Identities = 111/248 (44%), Positives = 154/248 (62%)

Query: 40  IHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYT 99
           I E IR++GE+ELER   AL WS IAAGL +  S+L K +F   L     S L+ENLGY+
Sbjct: 32  IFETIRRNGEEELERPVRALWWSGIAAGLLISFSVLGKAVFKTHLPDASWSPLVENLGYS 91

Query: 100 FGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLGNILGTGIAAWAFE 159
            GF++VI+ R QLFTENT+T V+PVM +   ++     RLWGVVL  N++G  + A  F 
Sbjct: 92  LGFLMVILGRMQLFTENTITTVVPVMLRWDKASFLRTARLWGVVLAANVVGAFLIASFFA 151

Query: 160 YMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILM 219
             P+ + + R A VKI        P     + I SG LIA +VWM P+   ++I +II+ 
Sbjct: 152 LTPVLDADLRAAMVKISEHATGMPPLIGLISGIPSGILIAAIVWMLPSTQHSEIPLIIIF 211

Query: 220 TWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQ 279
           TWLIA GD THIV GSVE+ +L+  G L     I+ F +P L GN+ GGT +F ++++AQ
Sbjct: 212 TWLIAAGDFTHIVAGSVEMAFLMVQGLLPLWQAIFGFFIPVLIGNVIGGTAVFTVLTYAQ 271

Query: 280 IRNDMSNK 287
           I+ ++  K
Sbjct: 272 IKPEIPEK 279